BLASTX nr result

ID: Scutellaria23_contig00022293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022293
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
emb|CAN83497.1| hypothetical protein VITISV_026967 [Vitis vinifera]    89   5e-16
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327...    88   6e-16
emb|CBI34587.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra...    88   8e-16

>ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|222846685|gb|EEE84232.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/74 (67%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
 Frame = -2

Query: 219 TGG-GGNSIMISQSTDASPVDSSATTATTPVDDPKQNLTQVINSIQKTLGILHQLYLTVS 43
           TGG GGN ++      A+PV+ +A  A T VDDPKQNL QVINSIQKTLG+LHQLYLTVS
Sbjct: 11  TGGIGGNGML------AAPVNDTA--AATAVDDPKQNLNQVINSIQKTLGLLHQLYLTVS 62

Query: 42  SYNVAAQLPLLQRM 1
           S+N A+QLPLLQR+
Sbjct: 63  SFNTASQLPLLQRL 76


>emb|CAN83497.1| hypothetical protein VITISV_026967 [Vitis vinifera]
          Length = 209

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
 Frame = -2

Query: 225 AATG---GGGNSIMISQSTDASPVDSSATTATTPVDDPKQNLTQVINSIQKTLGILHQLY 55
           AA+G    GGN I I Q  +A+   + A TA    +DPKQNL QVINSIQKTLG+LHQLY
Sbjct: 7   AASGTGVSGGNGITIPQ-INAAAAAAVAATAGAGSEDPKQNLNQVINSIQKTLGLLHQLY 65

Query: 54  LTVSSYNVAAQLPLLQRM 1
           LTVSS+NVA+QLPLLQR+
Sbjct: 66  LTVSSFNVASQLPLLQRL 83


>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
           putative [Ricinus communis]
          Length = 187

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = -2

Query: 225 AATGGGGNSIMISQSTDASPVDSSATTATTPVDDPKQNLTQVINSIQKTLGILHQLYLTV 46
           A  G GGN ++ SQ  D        T A    DDPKQNL  VINSIQKTLG+LHQLYLTV
Sbjct: 7   ATVGSGGNGMLPSQVND--------TAAAAAADDPKQNLNNVINSIQKTLGLLHQLYLTV 58

Query: 45  SSYNVAAQLPLLQRM 1
           SS+N A+QLPLLQR+
Sbjct: 59  SSFNTASQLPLLQRL 73


>emb|CBI34587.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
 Frame = -2

Query: 225 AATG---GGGNSIMISQSTDASPVDSSATTATTPVDDPKQNLTQVINSIQKTLGILHQLY 55
           AA+G    GGN I I Q   A+    +A TA    +DPKQNL QVINSIQKTLG+LHQLY
Sbjct: 97  AASGTGVSGGNGITIPQINAAA----AAATAGAGSEDPKQNLNQVINSIQKTLGLLHQLY 152

Query: 54  LTVSSYNVAAQLPLLQRM 1
           LTVSS+NVA+QLPLLQR+
Sbjct: 153 LTVSSFNVASQLPLLQRL 170


>ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10
           [Vitis vinifera]
          Length = 194

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
 Frame = -2

Query: 225 AATG---GGGNSIMISQSTDASPVDSSATTATTPVDDPKQNLTQVINSIQKTLGILHQLY 55
           AA+G    GGN I I Q   A+    +A TA    +DPKQNL QVINSIQKTLG+LHQLY
Sbjct: 7   AASGTGVSGGNGITIPQINAAA----AAATAGAGSEDPKQNLNQVINSIQKTLGLLHQLY 62

Query: 54  LTVSSYNVAAQLPLLQRM 1
           LTVSS+NVA+QLPLLQR+
Sbjct: 63  LTVSSFNVASQLPLLQRL 80


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