BLASTX nr result

ID: Scutellaria23_contig00022235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022235
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_003599152.1| Pentatricopeptide repeat-containing protein ...   111   7e-23
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
emb|CBI24193.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_003588474.1| Pentatricopeptide repeat-containing protein ...   108   5e-22

>ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus] gi|449497665|ref|XP_004160467.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  111 bits (278), Expect = 5e-23
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = +1

Query: 4    NLFNHSERLALGFALINKGSGGDIRIFKNLRICGDCHEFMKFVSGTMSQEIVVRDTSRFH 183
            N+++HSER+AL F LIN   G  +RIFKNLR+CGDCH F KFVSG + ++IV+RD  RFH
Sbjct: 866  NMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFH 925

Query: 184  HFRGGSCSCKDYW 222
            HF  G+CSC DYW
Sbjct: 926  HFTNGNCSCSDYW 938


>ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355488200|gb|AES69403.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  111 bits (277), Expect = 7e-23
 Identities = 47/73 (64%), Positives = 55/73 (75%)
 Frame = +1

Query: 4    NLFNHSERLALGFALINKGSGGDIRIFKNLRICGDCHEFMKFVSGTMSQEIVVRDTSRFH 183
            NL+NHSER+AL F LIN   G  +RIFKNLR+CGDCH   K VS  + ++IVVRD+ RFH
Sbjct: 1053 NLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFH 1112

Query: 184  HFRGGSCSCKDYW 222
            HF GG CSC DYW
Sbjct: 1113 HFHGGKCSCSDYW 1125


>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/73 (65%), Positives = 55/73 (75%)
 Frame = +1

Query: 4    NLFNHSERLALGFALINKGSGGDIRIFKNLRICGDCHEFMKFVSGTMSQEIVVRDTSRFH 183
            NL+NHSERLAL F LIN      +RIFKNLR+CGDCH   KFVSG + ++IV+RD  RFH
Sbjct: 1652 NLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFH 1711

Query: 184  HFRGGSCSCKDYW 222
            HF GG CSC DYW
Sbjct: 1712 HFSGGKCSCGDYW 1724


>emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/73 (65%), Positives = 55/73 (75%)
 Frame = +1

Query: 4    NLFNHSERLALGFALINKGSGGDIRIFKNLRICGDCHEFMKFVSGTMSQEIVVRDTSRFH 183
            NL+NHSERLAL F LIN      +RIFKNLR+CGDCH   KFVSG + ++IV+RD  RFH
Sbjct: 1011 NLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFH 1070

Query: 184  HFRGGSCSCKDYW 222
            HF GG CSC DYW
Sbjct: 1071 HFSGGKCSCGDYW 1083


>ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477522|gb|AES58725.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  108 bits (270), Expect = 5e-22
 Identities = 47/73 (64%), Positives = 58/73 (79%)
 Frame = +1

Query: 4   NLFNHSERLALGFALINKGSGGDIRIFKNLRICGDCHEFMKFVSGTMSQEIVVRDTSRFH 183
           NL  HSE+LAL FAL+N   G  IRI KN+R+CGDCH  +K+VS  + +EI+VRDT+RFH
Sbjct: 596 NLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFH 655

Query: 184 HFRGGSCSCKDYW 222
           HFR GSCSC+DYW
Sbjct: 656 HFRDGSCSCRDYW 668


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