BLASTX nr result

ID: Scutellaria23_contig00022138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022138
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]     60   2e-07
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]     60   2e-07
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] g...    60   2e-07
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]                   57   2e-06
gb|AEA39176.1| polyprotein [Dahlia mosaic virus]                       56   3e-06

>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -2

Query: 224 LVLYTDASDHWWAAVLMKATPDG-EMPCRYCSGLFPDSEAKWHINEKEFFAVRKAFKKW 51
           L++ TDASDH+W  VL   T +G E+ CRY SG F  +E  +H NEKE  AV++   K+
Sbjct: 541 LIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAELNYHSNEKELLAVKQVITKF 599


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -2

Query: 224 LVLYTDASDHWWAAVLMKATPDG-EMPCRYCSGLFPDSEAKWHINEKEFFAVRKAFKKW 51
           L++ TDASDH+W  VL   T +G E+ CRY SG F  +E  +H NEKE  AV++   K+
Sbjct: 541 LIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAELNYHSNEKELLAVKQVITKF 599


>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
           gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -2

Query: 224 LVLYTDASDHWWAAVLMKATPDGE-MPCRYCSGLFPDSEAKWHINEKEFFAVRKAFKKW 51
           L++ TDASDH+W  VL   T +GE + CRY SG F  +E  +H NEKE  AV++   K+
Sbjct: 539 LIIETDASDHFWGGVLKAQTTEGEELICRYSSGTFKPAELNYHSNEKELLAVKQVITKF 597


>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
          Length = 810

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/58 (44%), Positives = 35/58 (60%)
 Frame = -2

Query: 224 LVLYTDASDHWWAAVLMKATPDGEMPCRYCSGLFPDSEAKWHINEKEFFAVRKAFKKW 51
           L++ TDAS+ +W  VL   T + E  CRY SG F  +E  +H NEKE  AV+ A  K+
Sbjct: 684 LIIETDASNDYWGGVLKAKTAEKEEVCRYTSGSFKTAEKNYHSNEKELLAVKNAISKF 741


>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
          Length = 808

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = -2

Query: 224 LVLYTDASDHWWAAVLMKATPDGEMPCRYCSGLFPDSEAKWHINEKEFFAVRKAFKKW 51
           L++ TDAS+ +W  VL   T D E  CRY SG F  +E  +H NEKE  AV+    K+
Sbjct: 682 LIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEKNYHSNEKELLAVKNTISKF 739


Top