BLASTX nr result

ID: Scutellaria23_contig00022112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022112
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...    74   9e-12
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun...    74   2e-11
ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-lik...    72   4e-11
ref|XP_003524428.1| PREDICTED: tRNA pseudouridine synthase A-lik...    72   6e-11

>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/77 (50%), Positives = 45/77 (58%)
 Frame = +2

Query: 17  MKTMCIELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKLMDXXXXXXXXXXXXXDGLC 196
           ++ MC+EL+ANRFLRKMVRVLV               LLKLMD             DGLC
Sbjct: 352 IRVMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLC 411

Query: 197 LVDVGYTDFVRKTCLIP 247
           LVDVGYT+F  + CLIP
Sbjct: 412 LVDVGYTEFDPRNCLIP 428


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 443

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/80 (48%), Positives = 44/80 (55%)
 Frame = +2

Query: 8   GTSMKTMCIELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKLMDXXXXXXXXXXXXXD 187
           G   K MC+ELVANRFLRKMVRVLV               LLKLMD             D
Sbjct: 364 GEGRKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPD 423

Query: 188 GLCLVDVGYTDFVRKTCLIP 247
           GLCL DVGYT+F  + C++P
Sbjct: 424 GLCLFDVGYTEFDAQICIVP 443


>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
           gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase
           A [Medicago truncatula]
          Length = 400

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/81 (49%), Positives = 44/81 (54%)
 Frame = +2

Query: 2   KGGTSMKTMCIELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKLMDXXXXXXXXXXXX 181
           + G   + MCIELVANRFLRKMVRVLV               LLKLMD            
Sbjct: 317 ENGEETRVMCIELVANRFLRKMVRVLVATTIREAAAGAEDDALLKLMDATCRRATAPPAP 376

Query: 182 XDGLCLVDVGYTDFVRKTCLI 244
            DGLCLVDVGY +F R+ C I
Sbjct: 377 PDGLCLVDVGYAEFEREKCFI 397


>ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 404

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/79 (49%), Positives = 43/79 (54%)
 Frame = +2

Query: 8   GTSMKTMCIELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKLMDXXXXXXXXXXXXXD 187
           G   K MC+ELVANRFLRKMVRVLV               L+KLMD             D
Sbjct: 323 GEETKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPD 382

Query: 188 GLCLVDVGYTDFVRKTCLI 244
           GLCLVDVGYT+F  + C I
Sbjct: 383 GLCLVDVGYTEFEPQKCFI 401


>ref|XP_003524428.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 387

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/79 (49%), Positives = 43/79 (54%)
 Frame = +2

Query: 8   GTSMKTMCIELVANRFLRKMVRVLVXXXXXXXXXXXXXXXLLKLMDXXXXXXXXXXXXXD 187
           G   K MC+ELVA+RFLRKMVRVLV               L+KLMD             D
Sbjct: 306 GEETKVMCVELVADRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPD 365

Query: 188 GLCLVDVGYTDFVRKTCLI 244
           GLCLVDVGYT+F  K C I
Sbjct: 366 GLCLVDVGYTEFDPKKCFI 384


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