BLASTX nr result

ID: Scutellaria23_contig00022070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022070
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42885.1| unknown [Lotus japonicus]                              108   2e-21
ref|NP_064033.1| orf119b gene product (mitochondrion) [Beta vulg...    74   4e-11
emb|CBJ23356.1| hypothetical protein [Beta vulgaris subsp. marit...    74   5e-11
emb|CAA71807.1| hypothetical protein [Beta vulgaris subsp. marit...    74   5e-11
ref|YP_004935304.1| ATPase subunit 9 (mitochondrion) [Silene noc...    65   2e-08

>gb|AFK42885.1| unknown [Lotus japonicus]
          Length = 90

 Score =  108 bits (269), Expect = 2e-21
 Identities = 53/79 (67%), Positives = 60/79 (75%)
 Frame = -3

Query: 391 KREESPKRRDVRRC*INRCRSCYNCFSWSCSRYRKRLQFFNSFCCTKSIIG*TIIWLCHF 212
           +R++S   RDVRRC INRCRSCYNCFS SC RY KR+QF NSF   KSIIG  +I +C+ 
Sbjct: 3   ERDDSFSIRDVRRCKINRCRSCYNCFSGSCCRYWKRIQFINSFRGKKSIIGKAVIRICNP 62

Query: 211 RLCSNRSDCPVRINDGLFD 155
            LCSNR  C VRINDGLFD
Sbjct: 63  GLCSNRGYCLVRINDGLFD 81


>ref|NP_064033.1| orf119b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435058|ref|YP_004222276.1| hypothetical
           protein BevumaM_p038 [Beta vulgaris subsp. maritima]
           gi|346683151|ref|YP_004842083.1| hypothetical protein
           BemaM_p036 [Beta macrocarpa] gi|9049334|dbj|BAA99344.1|
           orf119b [Beta vulgaris subsp. vulgaris]
           gi|317905711|emb|CBJ14099.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439791|emb|CBJ17508.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148723|emb|CBJ23361.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500069|emb|CBX24885.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939200|emb|CBL52047.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 119

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
 Frame = +3

Query: 537 NRSILSRTVSSVKNWDVFTLTEKMANLKXXXXXXXXXXXXXXXXXPVYVCT----NTKGL 704
           N+SIL + +SSV++ DVF + + M NL                   +   +    +    
Sbjct: 2   NKSILFKAISSVESLDVFNIRKGMENLSLYDKTTSSSSASSASSSSLVKTSLSTPSNSTT 61

Query: 705 LDRFLKQIQHSDLTRSVIDRTKSAFIDIPNSICDITSKSTGYFLSLGFRFLPGQ 866
           L  F+   +HS  TR ++D+T++ FIDIP +I DI+SKS  + LSLGFRF PGQ
Sbjct: 62  LHTFMNSGKHSSFTRLIMDKTRAPFIDIPRNIMDISSKSKDFILSLGFRFKPGQ 115


>emb|CBJ23356.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 329

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = +3

Query: 549 LSRTVSSVK-NWDVFTLTEKMANLKXXXXXXXXXXXXXXXXXPVYVCTNTKGLLDRFLKQ 725
           LS  ++ ++ N +VF+LT KM++L                       T T+ +++RF K 
Sbjct: 39  LSNAINQIESNKEVFSLTHKMSHLSLNDKSASSSNT---------TLTTTEEIINRFQKL 89

Query: 726 IQHSDLTRSVIDRTKSAFIDIPNSICDITSKSTGYFLSLGFRFLPGQDSFLTKSLSLPD 902
              S  TR+++++TK+ FIDI   I  IT +S+ Y +SLGFRF+PGQ   L K L +P+
Sbjct: 90  SNPSTFTRNIMEKTKAPFIDILKPITSITERSSSYMMSLGFRFMPGQAECLVKDLRVPE 148


>emb|CAA71807.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 329

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
 Frame = +3

Query: 549 LSRTVSSVK-NWDVFTLTEKMANLKXXXXXXXXXXXXXXXXXPVYVCTNTKGLLDRFLKQ 725
           LS  ++ ++ N +VF+LT KM++L                       T T+ +++RF K 
Sbjct: 39  LSNAINQIESNKEVFSLTHKMSHLSLNDKSASSSNT---------TLTTTEEIINRFQKL 89

Query: 726 IQHSDLTRSVIDRTKSAFIDIPNSICDITSKSTGYFLSLGFRFLPGQDSFLTKSLSLPD 902
              S  TR+++++TK+ FIDI   I  IT +S+ Y +SLGFRF+PGQ   L K L +P+
Sbjct: 90  SNPSTFTRNIMEKTKAPFIDILKPITSITERSSSYMMSLGFRFMPGQAECLVKDLRVPE 148


>ref|YP_004935304.1| ATPase subunit 9 (mitochondrion) [Silene noctiflora]
           gi|57639533|gb|AAW55634.1| ATPase subunit 9 [Brassica
           juncea] gi|343526962|gb|AEM46209.1| ATPase subunit 9
           (mitochondrion) [Silene noctiflora]
          Length = 74

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = -1

Query: 288 NVFSSLIHSVARNPSLAKQLFGYAILGFALTE 193
           NVFSSLIHSVARNPSLAKQLFGYAILGFALTE
Sbjct: 26  NVFSSLIHSVARNPSLAKQLFGYAILGFALTE 57


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