BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022055
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   672   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              659   0.0  
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   646   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   602   e-169
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   598   e-169

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  672 bits (1734), Expect = 0.0
 Identities = 348/522 (66%), Positives = 396/522 (75%), Gaps = 5/522 (0%)
 Frame = +2

Query: 8    EDSQRSHTSHSTCLSGGESDVECN---KQASWDSCQLTEAMSVXXXXXXXXXXXXXXXXX 178
            EDS  SH S S+ ++    D  C+   KQ  W S Q  EAMSV                 
Sbjct: 199  EDSDGSHVSCSSTVNSSARD-NCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKA 257

Query: 179  XXPKINKPTFGWFHVSGISNADIRSNAIRSRRLDVTYSGGVEGQLSSEVAYASDYSRKED 358
              P++ KPTFGWFH++G+S+A  R+N IR  +L+   S   E + SSEV   +D     D
Sbjct: 258  KSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGD 317

Query: 359  S-ETAEAHSFNTASDSTKKPSQKGTDRKN-NLNQGLGDTSNYFSGPLLPSEVKDILRRLW 532
              +T E HS    +D  +    K  +RK            ++FSGPLLPSEV+DI+ RLW
Sbjct: 318  GVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLW 377

Query: 533  ENEAHLCSYISDIQHQQSKLSGGIAGYSMFFLETILVPPIKFRPPAQGGDSVMEHPHTIL 712
            ENEA LCS+ISDI  ++   SG  AGYSMFFLETILVPPIKFRPP++G  SVMEHP T+L
Sbjct: 378  ENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVL 437

Query: 713  LGKVLQSNIALGNAHMNNSELSRIISRWMDLQQSINVLFDSKTATSQSQKDGSSGICQFL 892
            LGKVLQ+NIALGNAH NNSE S+IISRWMDLQQSINVLFD KTA  Q Q+D  SGICQ L
Sbjct: 438  LGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLL 497

Query: 893  EKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPWNSGKLR 1072
            EKKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPE+VTPWN  KLR
Sbjct: 498  EKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLR 557

Query: 1073 AAVINGPEIHPGATTYADSVAAVKLPAKKKMRVAISRKLPSSRGVDAESGKINELEFEGK 1252
             A+INGPEIHPGAT Y D ++ VKL   KKMR++ISRKLPSSRGV A+ G+ ++ EFEGK
Sbjct: 558  DAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGK 617

Query: 1253 IVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINV 1432
            IVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NV
Sbjct: 618  IVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNV 677

Query: 1433 HFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQDHIVSA 1558
            HFPQDEISRAEAYNIVNAN QYIVP+RGD +RGLIQDHIVSA
Sbjct: 678  HFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSA 719


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  659 bits (1701), Expect = 0.0
 Identities = 341/521 (65%), Positives = 388/521 (74%), Gaps = 4/521 (0%)
 Frame = +2

Query: 8    EDSQRSHTSHSTCLSGGESDVECN---KQASWDSCQLTEAMSVXXXXXXXXXXXXXXXXX 178
            EDS  SH S S+ ++    D  C+   KQ  W S Q  EAMSV                 
Sbjct: 150  EDSDGSHVSCSSTVNSSARD-NCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKA 208

Query: 179  XXPKINKPTFGWFHVSGISNADIRSNAIRSRRLDVTYSGGVEGQLSSEVAYASDYSRKED 358
              P++ KPTFGWFH++G+S+A  R+N IR  +L+   +G                     
Sbjct: 209  KSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLNG--------------------- 247

Query: 359  SETAEAHSFNTASDSTKKPSQKGTDRKN-NLNQGLGDTSNYFSGPLLPSEVKDILRRLWE 535
             +T E HS    +D  +    K  +RK            ++FSGPLLPSEV+DI+ RLWE
Sbjct: 248  VDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWE 307

Query: 536  NEAHLCSYISDIQHQQSKLSGGIAGYSMFFLETILVPPIKFRPPAQGGDSVMEHPHTILL 715
            NEA LCS+ISDI  ++   SG  AGYSMFFLETILVPPIKFRPP++G  SVMEHP T+LL
Sbjct: 308  NEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLL 367

Query: 716  GKVLQSNIALGNAHMNNSELSRIISRWMDLQQSINVLFDSKTATSQSQKDGSSGICQFLE 895
            GKVLQ+NIALGNAH NNSE S+IISRWMDLQQSINVLFD KTA  Q Q+D  SGICQ LE
Sbjct: 368  GKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLE 427

Query: 896  KKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPWNSGKLRA 1075
            KKEG+FRQKMMGKRVNFACRSVISPDPYL+VNEIGIPPYFALRLTYPE+VTPWN  KLR 
Sbjct: 428  KKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRD 487

Query: 1076 AVINGPEIHPGATTYADSVAAVKLPAKKKMRVAISRKLPSSRGVDAESGKINELEFEGKI 1255
            A+INGPEIHPGAT Y D ++ VKL   KKMR++ISRKLPSSRGV A+ G+ ++ EFEGKI
Sbjct: 488  AIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKI 547

Query: 1256 VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVH 1435
            VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS+YNADFDGDE+NVH
Sbjct: 548  VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVH 607

Query: 1436 FPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQDHIVSA 1558
            FPQDEISRAEAYNIVNAN QYIVP+RGD +RGLIQDHIVSA
Sbjct: 608  FPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSA 648


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  646 bits (1667), Expect = 0.0
 Identities = 348/568 (61%), Positives = 396/568 (69%), Gaps = 51/568 (8%)
 Frame = +2

Query: 8    EDSQRSHTSHSTCLSGGESDVECN---KQASWDSCQLTEAMSVXXXXXXXXXXXXXXXXX 178
            EDS  SH S S+ ++    D  C+   KQ  W S Q  EAMSV                 
Sbjct: 219  EDSDGSHVSCSSTVNSSARD-NCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKA 277

Query: 179  XXPKINKPTFGWFHVSGISNADIRSNAIRSRRLDVTYSGGVEGQLSSEVAYASDYSRKED 358
              P++ KPTFGWFH++G+S+A  R+N IR  +L+   S   E + SSEV   +D     D
Sbjct: 278  KSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGD 337

Query: 359  S-ETAEAHSFNTASDSTKKPSQKGTDRKN-NLNQGLGDTSNYFSGPLLPSEV-------- 508
              +T E HS    +D  +    K  +RK            ++FSGPLLPSEV        
Sbjct: 338  GVDTDETHSSIAPTDGIQDTVTKXLERKGAQAPIEFIKQKSFFSGPLLPSEVCFLXALEH 397

Query: 509  --------------------KDILRRLWENEAHLCSYISDIQHQQSKLSGGIAGYSMFFL 628
                                +DI+ RLWENEA LCS+ISDI  ++   SG  AGYSMFFL
Sbjct: 398  HHQLPWLMSVVVVNYVVTKVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFL 457

Query: 629  ETILVPPIKFRPPAQGGDSVMEHPHTILLGKVLQSNIALGNAHMNNSELSRIISRWMDLQ 808
            ETILVPPIKFRPP++G  SVMEHP T+LLGKVLQ+NIALGNAH NNSE S+IISRWMDLQ
Sbjct: 458  ETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQ 517

Query: 809  QSINVLFDSKTATSQSQKDGSSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSV 988
            QSINVLFD KTA  Q Q+D  SGICQ LEKKEG+FRQKMMGKRVNFACRSVISPDPYL+V
Sbjct: 518  QSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAV 577

Query: 989  NEIGIPPYFALRLTYPERVTPWNSGKLRAAVINGPEIHPGATTYADSVAAVKLPAKKKMR 1168
            NEIGIPPYFALRLTYPE+VTPWN  KLR A+INGPEIHPGAT Y D ++ VKL   KKMR
Sbjct: 578  NEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMR 637

Query: 1169 VAISRKLPSSRGVDAESGKINELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 1348
            ++ISRKLPSSRGV A+ G+ ++ EFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV
Sbjct: 638  ISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 697

Query: 1349 LKGEKTLRMHYANC------------------SSYNADFDGDEINVHFPQDEISRAEAYN 1474
            LKGEKTLRMHYANC                  S+YNADFDGDE+NVHFPQDEISRAEAYN
Sbjct: 698  LKGEKTLRMHYANCRVESEHISMLDLDDCSDSSTYNADFDGDEMNVHFPQDEISRAEAYN 757

Query: 1475 IVNANEQYIVPTRGDTVRGLIQDHIVSA 1558
            IVNAN QYIVP+RGD +RGLIQDHIVSA
Sbjct: 758  IVNANNQYIVPSRGDPIRGLIQDHIVSA 785


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  602 bits (1551), Expect = e-169
 Identities = 321/519 (61%), Positives = 378/519 (72%), Gaps = 2/519 (0%)
 Frame = +2

Query: 8    EDSQRSHTSHSTCLSGGE-SDVECNKQASWDSCQLTEAMSVXXXXXXXXXXXXXXXXXXX 184
            E+S  SH S  T  SG + +D E  +Q  W S Q TEAMSV                   
Sbjct: 153  EESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSN 212

Query: 185  PKINKPTFGWFHVSGISNADIRSNAIRSRRLDVTYSGGVEGQLSSEVAYASDYSRKEDSE 364
            P I KPTFGWFH SG+S+A IR+N I   +L         G L SE+   +D   ++ +E
Sbjct: 213  PNITKPTFGWFHTSGMSDASIRANVITGHQLG--------GLLGSEIEGTTDV--EDAAE 262

Query: 365  TAEAHSFNTASDSTKKPSQKGTDRKNNLNQGLGDTSNYFSGPLLPSEVKDILRRLWENEA 544
              + HS       TKK  +K  +RK  L        + FS  LLPSEVK+ L  LW+NEA
Sbjct: 263  PGDQHS------GTKKHKKK--ERKEVLE--FTRQKSTFSKQLLPSEVKEKLELLWKNEA 312

Query: 545  HLCSYISDIQHQQSKLSGGIAGYSMFFLETILVPPIKFRPPAQGGDSVMEHPHTILLGKV 724
             +CS+ISD+Q Q+       AG +MFFLETILVPPIKFRPP +GGDSVMEHP T+LL KV
Sbjct: 313  RICSFISDLQQQE--FGKRKAGPAMFFLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKV 370

Query: 725  LQSNIALGNAHMNNSELSRIISRWMDLQQSINVLFDSKTATSQSQKDGSSGICQFLEKKE 904
            LQSNI+LG+AH+N  E S+I+ RW+DLQQSIN LFDSKTA    Q++G+ GICQ LEKKE
Sbjct: 371  LQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKTAKGPGQREGAPGICQLLEKKE 429

Query: 905  GIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFALRLTYPERVTPWNSGKLRAAVI 1084
            G+FRQKMMGKRVN+ACRSVISPDPY+ VNEIGIPP FA++LTYPERVTPWN  KLR AVI
Sbjct: 430  GLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVI 489

Query: 1085 NGPEIHPGATTYADSVAAVKLPAKKKMRVAISRKLPSSRGVDAESGKINELEFEGKIVYR 1264
            NG E HPGAT Y D ++  KLP  +K R++ISRKLPSSRG   ++GK +E EFEGKIVYR
Sbjct: 490  NGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTQAGKGSECEFEGKIVYR 549

Query: 1265 HLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS-SYNADFDGDEINVHFP 1441
            HLQDGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCS +YNADFDGDE+NVHFP
Sbjct: 550  HLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSITYNADFDGDEMNVHFP 609

Query: 1442 QDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQDHIVSA 1558
            QDE+SRAEAYNIVNAN Q++ P+ G+ +RGLIQDHIVSA
Sbjct: 610  QDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSA 648


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score =  598 bits (1543), Expect = e-169
 Identities = 307/490 (62%), Positives = 366/490 (74%)
 Frame = +2

Query: 89   SWDSCQLTEAMSVXXXXXXXXXXXXXXXXXXXPKINKPTFGWFHVSGISNADIRSNAIRS 268
            +W S Q +EAMSV                   PKI+KPTFGWFH++ +S  + R++ IRS
Sbjct: 175  NWTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRS 234

Query: 269  RRLDVTYSGGVEGQLSSEVAYASDYSRKEDSETAEAHSFNTASDSTKKPSQKGTDRKNNL 448
               + T                +D       +T +     T++ + K+  +K    K  L
Sbjct: 235  VESETT----------------NDDISLGGGDTTDVEDI-TSAGTAKRDKRK----KEKL 273

Query: 449  NQGLGDTSNYFSGPLLPSEVKDILRRLWENEAHLCSYISDIQHQQSKLSGGIAGYSMFFL 628
            +  L +  N  SG LLPS+VK IL  LWENEA LCSYI+DIQ Q     G  AG+SMFFL
Sbjct: 274  SYKLAE-QNKLSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFL 329

Query: 629  ETILVPPIKFRPPAQGGDSVMEHPHTILLGKVLQSNIALGNAHMNNSELSRIISRWMDLQ 808
            E I VPPIKFRPP +GGD+VMEHP T+LL KVLQ NI+LG+AH+N S+ S+++SRWMDLQ
Sbjct: 330  ENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQ 389

Query: 809  QSINVLFDSKTATSQSQKDGSSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSV 988
            QS+N+LFD+KTA+ +S++D ++GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+V
Sbjct: 390  QSVNMLFDNKTASGESKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 449

Query: 989  NEIGIPPYFALRLTYPERVTPWNSGKLRAAVINGPEIHPGATTYADSVAAVKLPAKKKMR 1168
            NEIGIPPYFALRL+YPERVTPWN  KLR A++NGPE HPGAT YAD V+ VKLP K K+ 
Sbjct: 450  NEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLL 509

Query: 1169 VAISRKLPSSRGVDAESGKINELEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 1348
               SRKLP+SRGV    GKI++ EFEGK+VYRHL+DGD+VLVNRQPTLHKPSIMAH+VRV
Sbjct: 510  SLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRV 569

Query: 1349 LKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVR 1528
            LKGEKT+RMHYANCS+YNADFDGDEINVHFPQDEISRAEAYNIVNAN QY+ PT GD +R
Sbjct: 570  LKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIR 629

Query: 1529 GLIQDHIVSA 1558
             LIQDHIVSA
Sbjct: 630  ALIQDHIVSA 639