BLASTX nr result

ID: Scutellaria23_contig00022025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022025
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   174   7e-42
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...   139   3e-31

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/133 (60%), Positives = 108/133 (81%)
 Frame = -1

Query: 407 PLTKFITVNNDRYFAYHPNITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSAL 228
           P    IT+NNDRYFA HP +++I++CS + QLKQIHAQMLR GLFFDPFSAS+LI ++AL
Sbjct: 20  PNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAAL 79

Query: 227 SEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTY 48
           S F SL+YA +VFDQIP PNLY+WN LIRAYA++S P   L +F R+L++  + P+KFT+
Sbjct: 80  SPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTF 139

Query: 47  PFVIKASAKIGDL 9
           PF+IKA++++ +L
Sbjct: 140 PFLIKAASELEEL 152


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/133 (60%), Positives = 108/133 (81%)
 Frame = -1

Query: 407 PLTKFITVNNDRYFAYHPNITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSAL 228
           P    IT+NNDRYFA HP +++I++CS + QLKQIHAQMLR GLFFDPFSAS+LI ++AL
Sbjct: 20  PNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAAL 79

Query: 227 SEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTY 48
           S F SL+YA +VFDQIP PNLY+WN LIRAYA++S P   L +F R+L++  + P+KFT+
Sbjct: 80  SPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTF 139

Query: 47  PFVIKASAKIGDL 9
           PF+IKA++++ +L
Sbjct: 140 PFLIKAASELEEL 152


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/133 (60%), Positives = 108/133 (81%)
 Frame = -1

Query: 407 PLTKFITVNNDRYFAYHPNITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSAL 228
           P    IT+NNDRYFA HP +++I++CS + QLKQIHAQMLR GLFFDPFSAS+LI ++AL
Sbjct: 20  PNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAAL 79

Query: 227 SEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFTY 48
           S F SL+YA +VFDQIP PNLY+WN LIRAYA++S P   L +F R+L++  + P+KFT+
Sbjct: 80  SPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTF 139

Query: 47  PFVIKASAKIGDL 9
           PF+IKA++++ +L
Sbjct: 140 PFLIKAASELEEL 152


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  167 bits (423), Expect = 8e-40
 Identities = 76/131 (58%), Positives = 103/131 (78%)
 Frame = -1

Query: 410 VPLTKFITVNNDRYFAYHPNITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSA 231
           + L  F T+NN+  F  H  ++ I+KCSSS QLK++HA+MLR GLFFDPFSASKL  +SA
Sbjct: 9   ISLQNFSTLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASA 68

Query: 230 LSEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFT 51
           LS FS+L+YA  +FDQIP+PNLY+WN LIRAYA++S P     +F  LL++C++ PNKFT
Sbjct: 69  LSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFT 128

Query: 50  YPFVIKASAKI 18
           +PFVIKA++++
Sbjct: 129 FPFVIKAASEL 139


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score =  139 bits (349), Expect = 3e-31
 Identities = 66/134 (49%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
 Frame = -1

Query: 407 PLTKFITVNNDRYFAYHPN-ITIIEKCSSSNQLKQIHAQMLRNGLFFDPFSASKLIQSSA 231
           P    +TV N R    H   +++I++C++   LK++HA +LR+GLFF P++ASKL   +A
Sbjct: 15  PNHSILTVPNGRPVTSHSQTLSLIDQCTNLKHLKELHATILRSGLFFHPYNASKLFSVAA 74

Query: 230 LSEFSSLEYAHKVFDQIPEPNLYSWNVLIRAYATASQPIDCLSVFTRLLNECDERPNKFT 51
           LS FSSL+YA KVF++I +PNLY+WN LIRA+A++ +PI  L +F R+L +  + PNKFT
Sbjct: 75  LSSFSSLDYARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFT 134

Query: 50  YPFVIKASAKIGDL 9
           +PFVIKA+A +  L
Sbjct: 135 FPFVIKAAAGVASL 148


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