BLASTX nr result

ID: Scutellaria23_contig00022023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00022023
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2...   251   8e-65
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...   246   3e-63
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi...   244   7e-63
emb|CBI25349.3| unnamed protein product [Vitis vinifera]              244   7e-63
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...   223   3e-56

>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
            predicted protein [Populus trichocarpa]
          Length = 848

 Score =  251 bits (641), Expect = 8e-65
 Identities = 121/204 (59%), Positives = 156/204 (76%), Gaps = 1/204 (0%)
 Frame = +3

Query: 12   KAIGLFHEMRNSGTEPDGITFLNLISSCNHCGLIEEGLNLFHSMR-GNGIEPNIYHYVNI 188
            KA+ LF EMR+ G  PD ITF++L++SCNHCG IEEGL LF  M   +GIEP + HYVNI
Sbjct: 643  KAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNI 702

Query: 189  VDLLGRGGYLDDAREFIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQRG 368
            VDLLGR G LDDA  F++ + I PDR +WLSLL + RVH NVE+G++AAH L+ ++P RG
Sbjct: 703  VDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRG 762

Query: 369  SNYVQLLNLYVEAGLKEKASNLRAVMRDKGLMKLPGCSWIESKNKVEVFFSGDSSSTKTV 548
            SNYVQLLNLY E  L+++A+NLRA M++KGL K PGCSWIE  N ++VFFSGDSSS +T+
Sbjct: 763  SNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTI 822

Query: 549  KIYEALESLKNIMKRRECDYEEGE 620
            +IY+ L SL+  M+++   YE  E
Sbjct: 823  EIYDLLNSLRRNMRKKGGHYESVE 846


>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score =  246 bits (627), Expect = 3e-63
 Identities = 120/199 (60%), Positives = 154/199 (77%), Gaps = 2/199 (1%)
 Frame = +3

Query: 3    ECHKAIGLFHEMRNSGTEPDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNIYHY 179
            EC KAI LF EMR+SG +PD +TFL+L+SSCNH GLIEEGL+LF  M+   GIEP + HY
Sbjct: 625  ECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHY 684

Query: 180  VNIVDLLGRGGYLDDAREFIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDP 359
            VNIVDL GR G L DA  F++ M + PDR +WLSLL + ++H N+E+GEM A+ L+ M+P
Sbjct: 685  VNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEP 744

Query: 360  QRGSNYVQLLNLYVEAGLKEKASNLRAVMRDKGLMKLPGCSWIESKNKVEVFFSGDSSST 539
             +GSNYVQLLNLY EA L ++ +NLRA M++KGL K PGCSWIE +NKV+VF+SGD SS 
Sbjct: 745  SKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSP 804

Query: 540  KTVKIYEALESLK-NIMKR 593
             T +IY+ L SLK N++K+
Sbjct: 805  ITTEIYDTLSSLKRNMIKK 823


>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
            [Vitis vinifera]
          Length = 836

 Score =  244 bits (624), Expect = 7e-63
 Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
 Frame = +3

Query: 6    CHKAIGLFHEMRNSGTEPDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNIYHYV 182
            C +A+ LF EM+ S T PD +TFL LI+SC+H G++EEGLNLF  MR   G+EP + HY 
Sbjct: 629  CEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYA 688

Query: 183  NIVDLLGRGGYLDDAREFIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQ 362
            ++VDLLGR G LDDA  FI  M I  DR VWL LL A R H+N+E+GE+ A NL+KM+P 
Sbjct: 689  SVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPA 748

Query: 363  RGSNYVQLLNLYVEAGLKEKASNLRAVMRDKGLMKLPGCSWIESKNKVEVFFSGDSSSTK 542
            RGSNYV LLNLY E  + ++A+NLRA M+ +GL K PGCSWIE KN+V+VFFSGDSSST+
Sbjct: 749  RGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTR 808

Query: 543  TVKIYEALESLKNIMKRRECDYE 611
             ++IY+ L SLK+ M+ + C YE
Sbjct: 809  RIEIYKTLSSLKSNMEGKGCSYE 831


>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  244 bits (624), Expect = 7e-63
 Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
 Frame = +3

Query: 6    CHKAIGLFHEMRNSGTEPDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNIYHYV 182
            C +A+ LF EM+ S T PD +TFL LI+SC+H G++EEGLNLF  MR   G+EP + HY 
Sbjct: 1034 CEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYA 1093

Query: 183  NIVDLLGRGGYLDDAREFIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQ 362
            ++VDLLGR G LDDA  FI  M I  DR VWL LL A R H+N+E+GE+ A NL+KM+P 
Sbjct: 1094 SVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPA 1153

Query: 363  RGSNYVQLLNLYVEAGLKEKASNLRAVMRDKGLMKLPGCSWIESKNKVEVFFSGDSSSTK 542
            RGSNYV LLNLY E  + ++A+NLRA M+ +GL K PGCSWIE KN+V+VFFSGDSSST+
Sbjct: 1154 RGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTR 1213

Query: 543  TVKIYEALESLKNIMKRRECDYE 611
             ++IY+ L SLK+ M+ + C YE
Sbjct: 1214 RIEIYKTLSSLKSNMEGKGCSYE 1236


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  223 bits (567), Expect = 3e-56
 Identities = 106/196 (54%), Positives = 142/196 (72%), Gaps = 1/196 (0%)
 Frame = +3

Query: 3    ECHKAIGLFHEMRNSGTEPDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNIYHY 179
            +C  A+ LF EM+ +G  PD +TFL+LIS+CNH G +EEG N+F  M+ + GIEPN+ HY
Sbjct: 658  DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHY 717

Query: 180  VNIVDLLGRGGYLDDAREFIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDP 359
             N+VDLLGR G L++A  FI+ M I  D  +WL LLSASR H NVE+G ++A  L++M+P
Sbjct: 718  ANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEP 777

Query: 360  QRGSNYVQLLNLYVEAGLKEKASNLRAVMRDKGLMKLPGCSWIESKNKVEVFFSGDSSST 539
            +RGS YVQL+NLY+EAGLK +A+ L  +M++KGL K PGCSWIE  ++  VFFSG SSS 
Sbjct: 778  ERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSP 837

Query: 540  KTVKIYEALESLKNIM 587
               +I+  L  LK+ M
Sbjct: 838  MKAEIFNVLNRLKSNM 853


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