BLASTX nr result

ID: Scutellaria23_contig00021815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00021815
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...   258   2e-66
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...   258   2e-66
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   256   9e-66
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              256   9e-66
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   256   9e-66

>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 856

 Score =  258 bits (659), Expect = 2e-66
 Identities = 140/268 (52%), Positives = 183/268 (68%), Gaps = 3/268 (1%)
 Frame = +2

Query: 332  FLSIALLVLPLTTVRASSTADFQVGVILDIHSSDSPVGQIGKRSLCMAQTDFYSVHSDYK 511
            FLS+    + +   + +++    VGV+LD+   D   G IG   + MA +DFY+ HSDYK
Sbjct: 13   FLSLKFFFVAMGVAQDTTSIPVNVGVVLDL--DDVLYGNIGLSCINMALSDFYASHSDYK 70

Query: 512  SRLVLNFRDSNDSVVDAAGAVLDLMKDVQVDAIIGPQKSIQANFLMDLGDRAQVPIISFS 691
            +RLVL   DS   VV AA A LDL+K+V+V AIIGP  S+QA F+++LG++AQVPIISFS
Sbjct: 71   TRLVLTTIDSKRDVVGAAAAALDLIKNVEVQAIIGPTSSMQAKFVIELGEKAQVPIISFS 130

Query: 692  ATSPLFP--RTPYFVQTAQSDANQVQSIASIVQAFQWNQVVVIYEDTVFGNGIIPYLCNA 865
            A+SP     R+PYF +  Q+D+ QV +I ++VQAF W   V IY D  +G GIIPYL  A
Sbjct: 131  ASSPSLTSIRSPYFFRATQNDSTQVNAITALVQAFGWRAAVPIYIDNEYGEGIIPYLTEA 190

Query: 866  LQDVNVRVSYRSVIPRSASDDFISDELHKMMTRQTRVFVVHMSQSLGTRFFLKAKGLGMM 1045
            LQ V+ RV Y+SVI  SA+DD I  EL+K+MT QTRVF+VHM QSLGTR F KAK +GMM
Sbjct: 191  LQAVDARVPYQSVISPSATDDQIVKELYKLMTMQTRVFIVHMYQSLGTRLFAKAKEIGMM 250

Query: 1046 SEGYAWIVTSGM-IDLFNLVDLDVVEAM 1126
            SEGY WI+T G+  DL +  +  V + M
Sbjct: 251  SEGYVWIMTDGLTADLLSTPNYSVTDTM 278


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 866

 Score =  258 bits (659), Expect = 2e-66
 Identities = 134/236 (56%), Positives = 175/236 (74%), Gaps = 2/236 (0%)
 Frame = +2

Query: 380  SSTADFQVGVILDIHSSDSPVGQIGKRSLCMAQTDFYSVHSDYKSRLVLNFRDSNDSVVD 559
            +S+    VGV+LD+ S ++    I    + MA +DFY+ H DYK+RLVLN RDS   V+ 
Sbjct: 8    TSSIPVNVGVVLDLASLEA---NIALSCINMALSDFYASHGDYKTRLVLNTRDSKKDVIG 64

Query: 560  AAGAVLDLMKDVQVDAIIGPQKSIQANFLMDLGDRAQVPIISFSATSPLFP--RTPYFVQ 733
            AA A LDL+K+V+V AI+GP  S+QANF++DLG++AQVPIISFSATSP     R+ YF++
Sbjct: 65   AAAAALDLIKNVEVQAILGPNTSMQANFVIDLGEKAQVPIISFSATSPSLTSIRSSYFLR 124

Query: 734  TAQSDANQVQSIASIVQAFQWNQVVVIYEDTVFGNGIIPYLCNALQDVNVRVSYRSVIPR 913
              Q+D+ QV +I++IVQAF W + V IY D  +G GIIPYL +ALQ+V+ RV YRSVI  
Sbjct: 125  ATQNDSAQVNAISAIVQAFGWREAVPIYIDNEYGEGIIPYLTDALQEVDARVPYRSVISP 184

Query: 914  SASDDFISDELHKMMTRQTRVFVVHMSQSLGTRFFLKAKGLGMMSEGYAWIVTSGM 1081
            SA+DD I +EL+K+MT QTRVF+VHM  SLGTR F KAK +GMMSEGY WI+T G+
Sbjct: 185  SATDDQIVEELYKLMTMQTRVFIVHMYPSLGTRLFTKAKEIGMMSEGYVWIMTDGL 240


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  256 bits (653), Expect = 9e-66
 Identities = 135/267 (50%), Positives = 190/267 (71%), Gaps = 2/267 (0%)
 Frame = +2

Query: 332  FLSIALLVLPLTTVRASSTADFQVGVILDIHSSDSPVGQIGKRSLCMAQTDFYSVHSDYK 511
            FLS+ +L + +   + ++T    VGV+LD    D+  G++G   + MA +DFY+ H +YK
Sbjct: 14   FLSLWVLFIEMGMAQ-NTTIPVNVGVVLDF---DTSFGKMGLSCIPMALSDFYASHGNYK 69

Query: 512  SRLVLNFRDSNDSVVDAAGAVLDLMKDVQVDAIIGPQKSIQANFLMDLGDRAQVPIISFS 691
            +RLVL  RDS   VV AA A LDL+++ +V AIIGP  S+QANFL+ LG +AQVPIISFS
Sbjct: 70   TRLVLKTRDSRRDVVGAAAAALDLIQNEEVQAIIGPGSSMQANFLIVLGQKAQVPIISFS 129

Query: 692  ATSPLFP--RTPYFVQTAQSDANQVQSIASIVQAFQWNQVVVIYEDTVFGNGIIPYLCNA 865
            A+SP     R+ YF++   +D+ QV +I +I QAF+W + V+IY D  +G+GIIPY+ +A
Sbjct: 130  ASSPSLSSLRSQYFIRATLNDSAQVPAIIAIFQAFEWREAVLIYVDNEYGDGIIPYMTDA 189

Query: 866  LQDVNVRVSYRSVIPRSASDDFISDELHKMMTRQTRVFVVHMSQSLGTRFFLKAKGLGMM 1045
            LQ ++VRV+YRSVI  SA+DD I +EL+K+MT QTRVF+VHM   LG+RFF KA  +GMM
Sbjct: 190  LQGIDVRVTYRSVISPSATDDQIGEELYKLMTMQTRVFIVHMVTPLGSRFFTKADEIGMM 249

Query: 1046 SEGYAWIVTSGMIDLFNLVDLDVVEAM 1126
             EGY WI+T G+ DL + +D  V+++M
Sbjct: 250  EEGYVWILTDGLTDLLSTLDPLVIDSM 276


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  256 bits (653), Expect = 9e-66
 Identities = 135/267 (50%), Positives = 190/267 (71%), Gaps = 2/267 (0%)
 Frame = +2

Query: 332  FLSIALLVLPLTTVRASSTADFQVGVILDIHSSDSPVGQIGKRSLCMAQTDFYSVHSDYK 511
            FLS+ +L + +   + ++T    VGV+LD    D+  G++G   + MA +DFY+ H +YK
Sbjct: 14   FLSLWVLFIEMGMAQ-NTTIPVNVGVVLDF---DTSFGKMGLSCIPMALSDFYASHGNYK 69

Query: 512  SRLVLNFRDSNDSVVDAAGAVLDLMKDVQVDAIIGPQKSIQANFLMDLGDRAQVPIISFS 691
            +RLVL  RDS   VV AA A LDL+++ +V AIIGP  S+QANFL+ LG +AQVPIISFS
Sbjct: 70   TRLVLKTRDSRRDVVGAAAAALDLIQNEEVQAIIGPGSSMQANFLIVLGQKAQVPIISFS 129

Query: 692  ATSPLFP--RTPYFVQTAQSDANQVQSIASIVQAFQWNQVVVIYEDTVFGNGIIPYLCNA 865
            A+SP     R+ YF++   +D+ QV +I +I QAF+W + V+IY D  +G+GIIPY+ +A
Sbjct: 130  ASSPSLSSLRSQYFIRATLNDSAQVPAIIAIFQAFEWREAVLIYVDNEYGDGIIPYMTDA 189

Query: 866  LQDVNVRVSYRSVIPRSASDDFISDELHKMMTRQTRVFVVHMSQSLGTRFFLKAKGLGMM 1045
            LQ ++VRV+YRSVI  SA+DD I +EL+K+MT QTRVF+VHM   LG+RFF KA  +GMM
Sbjct: 190  LQGIDVRVTYRSVISPSATDDQIGEELYKLMTMQTRVFIVHMVTPLGSRFFTKADEIGMM 249

Query: 1046 SEGYAWIVTSGMIDLFNLVDLDVVEAM 1126
             EGY WI+T G+ DL + +D  V+++M
Sbjct: 250  EEGYVWILTDGLTDLLSTLDPLVIDSM 276


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  256 bits (653), Expect = 9e-66
 Identities = 135/267 (50%), Positives = 190/267 (71%), Gaps = 2/267 (0%)
 Frame = +2

Query: 332  FLSIALLVLPLTTVRASSTADFQVGVILDIHSSDSPVGQIGKRSLCMAQTDFYSVHSDYK 511
            FLS+ +L + +   + ++T    VGV+LD    D+  G++G   + MA +DFY+ H +YK
Sbjct: 14   FLSLWVLFIEMGMAQ-NTTIPVNVGVVLDF---DTSFGKMGLSCIPMALSDFYASHGNYK 69

Query: 512  SRLVLNFRDSNDSVVDAAGAVLDLMKDVQVDAIIGPQKSIQANFLMDLGDRAQVPIISFS 691
            +RLVL  RDS   VV AA A LDL+++ +V AIIGP  S+QANFL+ LG +AQVPIISFS
Sbjct: 70   TRLVLKTRDSRRDVVGAAAAALDLIQNEEVQAIIGPGSSMQANFLIVLGQKAQVPIISFS 129

Query: 692  ATSPLFP--RTPYFVQTAQSDANQVQSIASIVQAFQWNQVVVIYEDTVFGNGIIPYLCNA 865
            A+SP     R+ YF++   +D+ QV +I +I QAF+W + V+IY D  +G+GIIPY+ +A
Sbjct: 130  ASSPSLSSLRSQYFIRATLNDSAQVPAIIAIFQAFEWREAVLIYVDNEYGDGIIPYMTDA 189

Query: 866  LQDVNVRVSYRSVIPRSASDDFISDELHKMMTRQTRVFVVHMSQSLGTRFFLKAKGLGMM 1045
            LQ ++VRV+YRSVI  SA+DD I +EL+K+MT QTRVF+VHM   LG+RFF KA  +GMM
Sbjct: 190  LQGIDVRVTYRSVISPSATDDQIGEELYKLMTMQTRVFIVHMVTPLGSRFFTKADEIGMM 249

Query: 1046 SEGYAWIVTSGMIDLFNLVDLDVVEAM 1126
             EGY WI+T G+ DL + +D  V+++M
Sbjct: 250  EEGYVWILTDGLTDLLSTLDPLVIDSM 276


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