BLASTX nr result

ID: Scutellaria23_contig00021725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00021725
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   175   5e-42
ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containi...   175   5e-42
ref|NP_198787.1| pentatricopeptide repeat-containing protein [Ar...   174   9e-42
ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata] g...   171   7e-41

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  182 bits (463), Expect = 3e-44
 Identities = 98/173 (56%), Positives = 125/173 (72%)
 Frame = -2

Query: 523 NTFLVDKAIAILKRHHPSLLDPLSSQFTPEATANLLLRSQHDQTLILKFINWARKLPFFS 344
           +  LVDKAI +LK  HP  LD LSS+FTP++ +  LL+SQ DQTL LKF+ WAR  PFF 
Sbjct: 30  HALLVDKAITLLK-FHPHHLDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHPFFD 88

Query: 343 NQLQCHCLSIHILTRFKLYKTAQSLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVF 164
           +   C CLS+HILTRFKLYKTAQ+LA+++A+    D  G S+F CL D+Y    SSS+VF
Sbjct: 89  SH--CKCLSLHILTRFKLYKTAQTLAQELALS-ASDPSGSSIFQCLKDSYHVYNSSSAVF 145

Query: 163 DLMVKALSNLRQIDRALNFMNSARDHGFMPSVLSYNCVLEGIIRRSARGCVDL 5
           DLMVK+ S+L  ID+A+N +N A+  GFMP VLSYN VL+ I+R  +RG V L
Sbjct: 146 DLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVR--SRGSVKL 196


>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  175 bits (444), Expect = 5e-42
 Identities = 90/164 (54%), Positives = 122/164 (74%)
 Frame = -2

Query: 523 NTFLVDKAIAILKRHHPSLLDPLSSQFTPEATANLLLRSQHDQTLILKFINWARKLPFFS 344
           +  L DKAI  L+RH P  L  LSS FTP+A++NLLL+SQ D +L+LKF++WAR   FFS
Sbjct: 20  DALLADKAIVYLRRH-PEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFS 78

Query: 343 NQLQCHCLSIHILTRFKLYKTAQSLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVF 164
              QC CL++HILTR+KLYKTAQSLAE+V VV   D  G+ +F CL ++Y  C SSS+VF
Sbjct: 79  --FQCKCLALHILTRYKLYKTAQSLAEEV-VVNTVDETGEDLFQCLKNSYYQCKSSSAVF 135

Query: 163 DLMVKALSNLRQIDRALNFMNSARDHGFMPSVLSYNCVLEGIIR 32
           DL+VK+ + +  I++AL+ +N A+ +GFMP VLSYN +L+ +IR
Sbjct: 136 DLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIR 179


>ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  175 bits (444), Expect = 5e-42
 Identities = 90/164 (54%), Positives = 122/164 (74%)
 Frame = -2

Query: 523 NTFLVDKAIAILKRHHPSLLDPLSSQFTPEATANLLLRSQHDQTLILKFINWARKLPFFS 344
           +  L DKAI  L+RH P  L  LSS FTP+A++NLLL+SQ D +L+LKF++WAR   FFS
Sbjct: 20  DALLADKAIVYLRRH-PEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFS 78

Query: 343 NQLQCHCLSIHILTRFKLYKTAQSLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVF 164
              QC CL++HILTR+KLYKTAQSLAE+V VV   D  G+ +F CL ++Y  C SSS+VF
Sbjct: 79  --FQCKCLALHILTRYKLYKTAQSLAEEV-VVNTVDETGEDLFQCLKNSYYQCKSSSAVF 135

Query: 163 DLMVKALSNLRQIDRALNFMNSARDHGFMPSVLSYNCVLEGIIR 32
           DL+VK+ + +  I++AL+ +N A+ +GFMP VLSYN +L+ +IR
Sbjct: 136 DLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIR 179


>ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
           gi|10177971|dbj|BAB11377.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 747

 Score =  174 bits (442), Expect = 9e-42
 Identities = 93/164 (56%), Positives = 117/164 (71%)
 Frame = -2

Query: 523 NTFLVDKAIAILKRHHPSLLDPLSSQFTPEATANLLLRSQHDQTLILKFINWARKLPFFS 344
           ++ L DKA+  LKRH P  L  LS+ FTPEA +NLLL+SQ+DQ LILKF+NWA    FF+
Sbjct: 21  DSLLADKALTFLKRH-PYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFT 79

Query: 343 NQLQCHCLSIHILTRFKLYKTAQSLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVF 164
             L+C C+++HILT+FKLYKTAQ LAEDVA     D     VF  L +TY  C S+SSVF
Sbjct: 80  --LRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVF 137

Query: 163 DLMVKALSNLRQIDRALNFMNSARDHGFMPSVLSYNCVLEGIIR 32
           DL+VK+ S L  ID+AL+ ++ A+ HGFMP VLSYN VL+  IR
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181


>ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
           gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 747

 Score =  171 bits (434), Expect = 7e-41
 Identities = 91/164 (55%), Positives = 117/164 (71%)
 Frame = -2

Query: 523 NTFLVDKAIAILKRHHPSLLDPLSSQFTPEATANLLLRSQHDQTLILKFINWARKLPFFS 344
           ++ L DKA+  LKRH P  L  LS+ FTPEA +NLLL+SQ++Q LILKF+ WA    FF+
Sbjct: 21  DSLLADKALTFLKRH-PYQLHHLSANFTPEAASNLLLKSQNNQELILKFLTWANPHQFFT 79

Query: 343 NQLQCHCLSIHILTRFKLYKTAQSLAEDVAVVFPGDAKGDSVFSCLVDTYQACGSSSSVF 164
             L+C C+++HILTRFKLYKTAQ+LAEDVA     D     VF  L +TY  C S+SSVF
Sbjct: 80  --LRCKCITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVF 137

Query: 163 DLMVKALSNLRQIDRALNFMNSARDHGFMPSVLSYNCVLEGIIR 32
           DL+VK+ S L  ID+AL+ ++ ++ HGFMP VLSYN VL+  IR
Sbjct: 138 DLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIR 181


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