BLASTX nr result

ID: Scutellaria23_contig00021680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00021680
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304597.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabid...   171   8e-41
gb|ABP49608.1| translesion synthesis DNA polymerase eta splice v...   171   8e-41
gb|ABP49609.1| translesion synthesis DNA polymerase eta splice v...   171   8e-41
ref|NP_851130.1| DNA polymerase eta subunit [Arabidopsis thalian...   171   8e-41

>ref|XP_002304597.1| predicted protein [Populus trichocarpa] gi|222842029|gb|EEE79576.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  173 bits (438), Expect = 2e-41
 Identities = 89/123 (72%), Positives = 105/123 (85%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   ERFESIGEEALESHILGLHSDGASD-RNCVREWFLASNGDRRDRLLACGAIIVAELRLKV 181
           E  ESI EE+ +SHILGL S+ A+D +  V +W   S+ + +D+LLACGA+IV+ELR++V
Sbjct: 39  ESLESINEESRKSHILGLKSEDANDAQENVSKWLRRSDANHQDKLLACGALIVSELRMEV 98

Query: 182 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTIVPSSSVNKLLESLPIKKMKQLGGKLGT 361
           LKET+FTCSAGIAHNKMLAKL SGMNKPAQQT+VPSSSV  LLESLPIKKMKQLGGKLGT
Sbjct: 99  LKETQFTCSAGIAHNKMLAKLVSGMNKPAQQTVVPSSSVKGLLESLPIKKMKQLGGKLGT 158

Query: 362 SLQ 370
           SLQ
Sbjct: 159 SLQ 161


>gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabidopsis thaliana]
           gi|9758378|dbj|BAB08827.1| DNA-damage-inducible protein
           P [Arabidopsis thaliana]
          Length = 689

 Score =  171 bits (432), Expect = 8e-41
 Identities = 88/123 (71%), Positives = 100/123 (81%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   ERFESIGEEALESHILGLH-SDGASDRNCVREWFLASNGDRRDRLLACGAIIVAELRLKV 181
           E  E I EE L+SHILG++  DG   +  VR W    + DRRD+LL+CG IIVAELR +V
Sbjct: 152 ESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRDKLLSCGIIIVAELRKQV 211

Query: 182 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTIVPSSSVNKLLESLPIKKMKQLGGKLGT 361
           LKETEFTCSAGIAHNKMLAKLASGMNKPAQQT+VP ++V +LL SLPIKKMKQLGGKLGT
Sbjct: 212 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQELLSSLPIKKMKQLGGKLGT 271

Query: 362 SLQ 370
           SLQ
Sbjct: 272 SLQ 274


>gb|ABP49608.1| translesion synthesis DNA polymerase eta splice variant
           [Arabidopsis thaliana]
          Length = 350

 Score =  171 bits (432), Expect = 8e-41
 Identities = 88/123 (71%), Positives = 100/123 (81%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   ERFESIGEEALESHILGLH-SDGASDRNCVREWFLASNGDRRDRLLACGAIIVAELRLKV 181
           E  E I EE L+SHILG++  DG   +  VR W    + DRRD+LL+CG IIVAELR +V
Sbjct: 140 ESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRDKLLSCGIIIVAELRKQV 199

Query: 182 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTIVPSSSVNKLLESLPIKKMKQLGGKLGT 361
           LKETEFTCSAGIAHNKMLAKLASGMNKPAQQT+VP ++V +LL SLPIKKMKQLGGKLGT
Sbjct: 200 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQELLSSLPIKKMKQLGGKLGT 259

Query: 362 SLQ 370
           SLQ
Sbjct: 260 SLQ 262


>gb|ABP49609.1| translesion synthesis DNA polymerase eta splice variant
           [Arabidopsis thaliana]
          Length = 442

 Score =  171 bits (432), Expect = 8e-41
 Identities = 88/123 (71%), Positives = 100/123 (81%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   ERFESIGEEALESHILGLH-SDGASDRNCVREWFLASNGDRRDRLLACGAIIVAELRLKV 181
           E  E I EE L+SHILG++  DG   +  VR W    + DRRD+LL+CG IIVAELR +V
Sbjct: 140 ESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRDKLLSCGIIIVAELRKQV 199

Query: 182 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTIVPSSSVNKLLESLPIKKMKQLGGKLGT 361
           LKETEFTCSAGIAHNKMLAKLASGMNKPAQQT+VP ++V +LL SLPIKKMKQLGGKLGT
Sbjct: 200 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQELLSSLPIKKMKQLGGKLGT 259

Query: 362 SLQ 370
           SLQ
Sbjct: 260 SLQ 262


>ref|NP_851130.1| DNA polymerase eta subunit [Arabidopsis thaliana]
           gi|13430742|gb|AAK25993.1|AF360283_1 putative
           DNA-damage-inducible protein P [Arabidopsis thaliana]
           gi|21280927|gb|AAM44927.1| putative DNA-damage-inducible
           protein P [Arabidopsis thaliana]
           gi|332007771|gb|AED95154.1| DNA polymerase eta subunit
           [Arabidopsis thaliana]
          Length = 588

 Score =  171 bits (432), Expect = 8e-41
 Identities = 88/123 (71%), Positives = 100/123 (81%), Gaps = 1/123 (0%)
 Frame = +2

Query: 5   ERFESIGEEALESHILGLH-SDGASDRNCVREWFLASNGDRRDRLLACGAIIVAELRLKV 181
           E  E I EE L+SHILG++  DG   +  VR W    + DRRD+LL+CG IIVAELR +V
Sbjct: 56  ESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRDKLLSCGIIIVAELRKQV 115

Query: 182 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTIVPSSSVNKLLESLPIKKMKQLGGKLGT 361
           LKETEFTCSAGIAHNKMLAKLASGMNKPAQQT+VP ++V +LL SLPIKKMKQLGGKLGT
Sbjct: 116 LKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPYAAVQELLSSLPIKKMKQLGGKLGT 175

Query: 362 SLQ 370
           SLQ
Sbjct: 176 SLQ 178


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