BLASTX nr result

ID: Scutellaria23_contig00021534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00021534
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...    83   7e-14
emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]    83   7e-14
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation spec...    73   6e-11
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec...    73   6e-11

>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Vitis vinifera]
          Length = 673

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = -3

Query: 393 KAPSGDRNESF----DQGKGQEVAGLIAXXXXXXXXXXXGKAQQEDRYSAGNSYRNDESE 226
           + P  DRN+ +    DQG+GQ++AG               K+QQ+D++  GNS+RNDESE
Sbjct: 600 RTPVNDRNDRYSGGSDQGRGQDMAG----PDDETQYLQGLKSQQDDQFGGGNSFRNDESE 655

Query: 225 SEDEAPRRSRHGEGKKKR 172
           SEDEAPRRSRHGEGKKKR
Sbjct: 656 SEDEAPRRSRHGEGKKKR 673


>emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]
          Length = 299

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = -3

Query: 393 KAPSGDRNESF----DQGKGQEVAGLIAXXXXXXXXXXXGKAQQEDRYSAGNSYRNDESE 226
           + P  DRN+ +    DQG+GQ++AG               K+QQ+D++  GNS+RNDESE
Sbjct: 226 RTPVNDRNDRYSGGSDQGRGQDMAG----PDDETQYLQGLKSQQDDQFGGGNSFRNDESE 281

Query: 225 SEDEAPRRSRHGEGKKKR 172
           SEDEAPRRSRHGEGKKKR
Sbjct: 282 SEDEAPRRSRHGEGKKKR 299


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
           gi|223537608|gb|EEF39232.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 702

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -3

Query: 285 KAQQEDRYSAGNSYRNDESESEDEAPRRSRHGEGKKKRRSLDAD 154
           KA  ED++ AGNS+RNDESESEDEAPRRSRHGEGKKKRR  + D
Sbjct: 652 KASHEDQFGAGNSFRNDESESEDEAPRRSRHGEGKKKRRGSEGD 695


>ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like, partial [Cucumis sativus]
          Length = 331

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/76 (48%), Positives = 47/76 (61%)
 Frame = -3

Query: 360 DQGKGQEVAGLIAXXXXXXXXXXXGKAQQEDRYSAGNSYRNDESESEDEAPRRSRHGEGK 181
           DQ KG E+    +            KA  +++Y  G ++RN+ESESEDEAPRRSRHGEGK
Sbjct: 258 DQNKGVEIQS--SGRDEEMQYKQGSKAYSDEQYGTGTTFRNEESESEDEAPRRSRHGEGK 315

Query: 180 KKRRSLDADDAAISGE 133
           KKRR  + D  AIS +
Sbjct: 316 KKRRGSEGDATAISNQ 331


>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Cucumis sativus]
          Length = 707

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 37/76 (48%), Positives = 47/76 (61%)
 Frame = -3

Query: 360 DQGKGQEVAGLIAXXXXXXXXXXXGKAQQEDRYSAGNSYRNDESESEDEAPRRSRHGEGK 181
           DQ KG E+    +            KA  +++Y  G ++RN+ESESEDEAPRRSRHGEGK
Sbjct: 634 DQNKGVEIQS--SGRDEEMQYKQGSKAYSDEQYGTGTTFRNEESESEDEAPRRSRHGEGK 691

Query: 180 KKRRSLDADDAAISGE 133
           KKRR  + D  AIS +
Sbjct: 692 KKRRGSEGDATAISNQ 707


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