BLASTX nr result

ID: Scutellaria23_contig00021445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00021445
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...    59   3e-07
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...    55   5e-06
emb|CBI32533.3| unnamed protein product [Vitis vinifera]               55   6e-06
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +3

Query: 189 VSILKHHRSKPRWSHLRSLLAAAKTNRLSPSQFSLISLQIRNNPHLVL 332
           +S+L HHRSK RWSHLRSLL    +  L+P  FSLI+L++++NPHL L
Sbjct: 44  ISLLTHHRSKSRWSHLRSLLTTTTSTPLAPGHFSLITLKLKSNPHLAL 91


>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = +3

Query: 186 AVSILKHHRSKPRWSHLRSLLAAAKTNRLSPSQFSLISLQIRNNPHLVLR 335
           AVSIL HHRSK RWS LRSL    + +  +PSQFS I+L +RNNPHL LR
Sbjct: 45  AVSILTHHRSKSRWSTLRSL----QPSGFTPSQFSEITLCLRNNPHLSLR 90


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = +3

Query: 186 AVSILKHHRSKPRWSHLRSLLAAAKTNRLSPSQFSLISLQIRNNPHLVLR 335
           AVSIL HHRSK RWS+LRS    A  N ++P++FS I+L I+N P L LR
Sbjct: 38  AVSILTHHRSKSRWSNLRS----ACPNGITPAEFSEITLHIKNKPQLALR 83


>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = +3

Query: 186 AVSILKHHRSKPRWSHLRSLLAAAKTNRLSPSQFSLISLQIRNNPHLVL 332
           AVSIL+H RSK RWSHL+SL     T    P++ S I LQI+NNPHL L
Sbjct: 40  AVSILRHQRSKSRWSHLQSLFPKGFT----PTEASQIVLQIKNNPHLAL 84


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = +3

Query: 186 AVSILKHHRSKPRWSHLRSLLAAAKTNRLSPSQFSLISLQIRNNPHLVL 332
           AVSIL+H RSK RWSHL+SL     T    P++ S I LQI+NNPHL L
Sbjct: 40  AVSILRHQRSKSRWSHLQSLFPKGFT----PTEASQIVLQIKNNPHLAL 84


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