BLASTX nr result

ID: Scutellaria23_contig00021140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00021140
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein lig...    57   2e-06
emb|CBI21880.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = +3

Query: 3   CQYVAMQTSMEASEVEILIIKDFH-PVNDSLGSGNDF---GVLKPCKNELELLNEHQTLG 170
           CQYVA QTS++A+EVEI ++++ +  V+ S+         G++ PCK++L++L E +TLG
Sbjct: 384 CQYVAFQTSLQANEVEIYLVREMNSKVDFSISMSTPISKPGIIDPCKDKLQVLEEQETLG 443

Query: 171 EIH-GSFTQQNLVLAYRQK 224
            +   +F    L+LAYR+K
Sbjct: 444 RLKTNNFIHGYLLLAYRKK 462


>ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 412

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
 Frame = +3

Query: 3   CQYVAMQTSMEASEVEILIIK----DFHPVNDSLGSGNDFG----VLKPCKNELELLNEH 158
           C+YVA+QT + A EVEIL++K    D+ P  +   S +D      V+ P K+EL++L   
Sbjct: 326 CEYVALQTPLRAEEVEILVVKGCHNDYQPFPNPSTSVDDLNPDPIVIDPSKDELQILEGQ 385

Query: 159 QTLG--EIHGSFTQQNLVLAYRQK 224
           +TL   + +G+  +  LVLAYRQK
Sbjct: 386 ETLVGLQANGTSCRNQLVLAYRQK 409


>emb|CBI21880.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
 Frame = +3

Query: 3   CQYVAMQTSMEASEVEILIIK----DFHPVNDSLGSGNDFG----VLKPCKNELELLNEH 158
           C+YVA+QT + A EVEIL++K    D+ P  +   S +D      V+ P K+EL++L   
Sbjct: 482 CEYVALQTPLRAEEVEILVVKGCHNDYQPFPNPSTSVDDLNPDPIVIDPSKDELQILEGQ 541

Query: 159 QTLG--EIHGSFTQQNLVLAYRQK 224
           +TL   + +G+  +  LVLAYRQK
Sbjct: 542 ETLVGLQANGTSCRNQLVLAYRQK 565


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
 Frame = +3

Query: 3   CQYVAMQTSMEASEVEILIIKDFHPVND---SLGSG-NDFGVLKPCKNELELLNEHQTLG 170
           CQYVA QTS++A+EVEI +++D +   D   S+ S  +  G++ PCK++L++L +H+TLG
Sbjct: 369 CQYVAFQTSLQANEVEIYLVQDMNSKLDFSLSMSSPVSRHGIIDPCKDKLQVLEQHETLG 428


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