BLASTX nr result

ID: Scutellaria23_contig00021048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00021048
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
emb|CBI23204.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002874797.1| pentatricopeptide repeat-containing protein ...   110   9e-23

>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/101 (59%), Positives = 76/101 (75%)
 Frame = +3

Query: 192 IGRLSAQGFHREVLLTFTHILDFPHTPPDAFTYPSLLKACTSLSFYSLGLSLHQQVTVNG 371
           I   S+QG HR+VL T+  +L   H P DA+T+PSLLKAC+SL+ +SLGLSLHQ++ V+G
Sbjct: 41  INHHSSQGAHRQVLATYASMLK-THVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSG 99

Query: 372 FFSDPYISSSLINFYAKSNNTEYARKVFDMMPYRNIVPWTA 494
              D YI+SSLINFYAK    + ARKVFD MP RN+VPWT+
Sbjct: 100 LSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTS 140


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/100 (57%), Positives = 72/100 (72%)
 Frame = +3

Query: 192 IGRLSAQGFHREVLLTFTHILDFPHTPPDAFTYPSLLKACTSLSFYSLGLSLHQQVTVNG 371
           I   S QG H +VL T+  +L   H P DA+T+PSLLKAC+ L+ +SLGL+LHQ++ V+G
Sbjct: 33  INHHSTQGAHHQVLATYASMLK-THVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSG 91

Query: 372 FFSDPYISSSLINFYAKSNNTEYARKVFDMMPYRNIVPWT 491
              D YI+SSLINFYAK    + ARKVFD MP RN+VPWT
Sbjct: 92  LSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWT 131


>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/100 (58%), Positives = 74/100 (74%)
 Frame = +3

Query: 192 IGRLSAQGFHREVLLTFTHILDFPHTPPDAFTYPSLLKACTSLSFYSLGLSLHQQVTVNG 371
           I RLS  G   +VLLT++ +L    TPPDA T+PSL+KACTSL  +S GLS HQ+V V+G
Sbjct: 20  INRLSTAGAFCDVLLTYSSMLS-TDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDG 78

Query: 372 FFSDPYISSSLINFYAKSNNTEYARKVFDMMPYRNIVPWT 491
           + SD YI++SLINFY+K  + + ARKVFD M  RN+VPWT
Sbjct: 79  YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWT 118


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/100 (58%), Positives = 74/100 (74%)
 Frame = +3

Query: 192 IGRLSAQGFHREVLLTFTHILDFPHTPPDAFTYPSLLKACTSLSFYSLGLSLHQQVTVNG 371
           I RLS  G   +VLLT++ +L    TPPDA T+PSL+KACTSL  +S GLS HQ+V V+G
Sbjct: 20  INRLSTAGAFCDVLLTYSSMLS-TDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDG 78

Query: 372 FFSDPYISSSLINFYAKSNNTEYARKVFDMMPYRNIVPWT 491
           + SD YI++SLINFY+K  + + ARKVFD M  RN+VPWT
Sbjct: 79  YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWT 118


>ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320634|gb|EFH51056.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 748

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/101 (58%), Positives = 71/101 (70%)
 Frame = +3

Query: 192 IGRLSAQGFHREVLLTFTHILDFPHTPPDAFTYPSLLKACTSLSFYSLGLSLHQQVTVNG 371
           I  LS+ G H++VL TF+ +L      PD FT+PSLLKACTSL   S GLS+HQ+V VNG
Sbjct: 18  INHLSSHGDHKQVLSTFSSMLA-NKLLPDTFTFPSLLKACTSLQLLSFGLSIHQKVLVNG 76

Query: 372 FFSDPYISSSLINFYAKSNNTEYARKVFDMMPYRNIVPWTA 494
           F SD YISSSL+N YAK     +ARKVFD M  R++V WTA
Sbjct: 77  FSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTA 117


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