BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020886
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_003602250.1| Pentatricopeptide repeat-containing protein ...   130   1e-28
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
emb|CBI34116.3| unnamed protein product [Vitis vinifera]              123   1e-26

>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/124 (57%), Positives = 95/124 (76%)
 Frame = -3

Query: 372 PSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFAL 193
           P++ MY KLI AFCR GDM++A+  FD ++ RG++PD+I YTMM+NGYC+VNCL+EA  +
Sbjct: 606 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 665

Query: 192 FGDMKERGITPDIITYTVLVDGQSKISRRRARSHNDIGINRKAKQLASTFWCEMKEMELK 13
           F DMKERGI PD+ITYTV++DG SK++ + ARS      + + K  AS FW EMKEM +K
Sbjct: 666 FNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIK 725

Query: 12  PDVI 1
           PDV+
Sbjct: 726 PDVV 729



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = -3

Query: 366 KTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALFG 187
           + +Y+ ++ A C+ G +E+A    + M  R +S D++ YT ++ GYC    L +A  +F 
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFE 461

Query: 186 DMKERGITPDIITYTVLVDGQSK 118
           +MKERGI PDI+TY +LV G S+
Sbjct: 462 EMKERGIEPDIVTYNILVGGFSR 484



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = -3

Query: 336 FCRAGDMEK--ARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALFGDMKERGIT 163
           F +  + EK  A   +  M   G+ PD++ YT++++ +C+ N LQ+A  L+ +M  RG+ 
Sbjct: 701 FSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQ 760

Query: 162 PDIITYTVLV 133
           PDI+TYT L+
Sbjct: 761 PDIVTYTALL 770



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/92 (31%), Positives = 46/92 (50%)
 Frame = -3

Query: 372  PSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFAL 193
            P    Y  LI + C+  +++ A   +D M+ RGL PD++ YT +L+  C    +  A  L
Sbjct: 726  PDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITL 785

Query: 192  FGDMKERGITPDIITYTVLVDGQSKISRRRAR 97
              +M  +GI PD    +VL  G  K  + + R
Sbjct: 786  VNEMSFKGIEPDSRAMSVLHRGILKARKVQFR 817


>ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491298|gb|AES72501.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/123 (48%), Positives = 84/123 (68%)
 Frame = -3

Query: 369 SKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALF 190
           SK +Y K++A  C+ G+M++AR  FD  L RG +PD++ YT+M+  YC +NCLQEA  LF
Sbjct: 584 SKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLF 643

Query: 189 GDMKERGITPDIITYTVLVDGQSKISRRRARSHNDIGINRKAKQLASTFWCEMKEMELKP 10
            DMK RGI PD+ITYTVL+DG+SK +R +    +  G  + A    ST W +MK+ E+ P
Sbjct: 644 QDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSP 703

Query: 9   DVI 1
           DV+
Sbjct: 704 DVV 706



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 15/101 (14%)
 Frame = -3

Query: 372 PSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFA- 196
           P    Y  +I ++C    +++A   F +M +RG+ PD+I YT++L+G  +    +E F+ 
Sbjct: 618 PDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHFSS 677

Query: 195 --------------LFGDMKERGITPDIITYTVLVDGQSKI 115
                         ++ DMK+R ++PD++ YTVL+DG  K+
Sbjct: 678 QHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKV 718



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/55 (38%), Positives = 41/55 (74%)
 Frame = -3

Query: 291 NMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALFGDMKERGITPDIITYTVLVDG 127
           +M +R +SPD+++YT++++G+ +V+  ++A  LF ++ +RG+ PD +TYT L  G
Sbjct: 695 DMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSG 749


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/124 (49%), Positives = 91/124 (73%)
 Frame = -3

Query: 372 PSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFAL 193
           P+  MY K+I A  +AG+MEKA++ F+ +++RGL+PD+I YT+M+NGYC++N ++EA+ +
Sbjct: 598 PTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHV 657

Query: 192 FGDMKERGITPDIITYTVLVDGQSKISRRRARSHNDIGINRKAKQLASTFWCEMKEMELK 13
            GDMK RGI PD+ITYTVL++  SKI  R + S  D   +++     S  W EMK+M++K
Sbjct: 658 LGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIK 717

Query: 12  PDVI 1
           PDVI
Sbjct: 718 PDVI 721



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = -3

Query: 372 PSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFAL 193
           P    Y  LI   C+  +++ A   F+ M++RGL+PD + YT +L+GYC V  +++A  L
Sbjct: 718 PDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVL 777

Query: 192 FGDMKERGITPDIITYTVL 136
           F +M  +GI PD  T +VL
Sbjct: 778 FDEMLNKGIRPDAHTMSVL 796



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/61 (36%), Positives = 40/61 (65%)
 Frame = -3

Query: 297 FDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALFGDMKERGITPDIITYTVLVDGQSK 118
           +  M +  + PD+I YT++++ +C+ N +Q+A  LF +M +RG+ PD +TYT L+ G   
Sbjct: 708 WSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCN 767

Query: 117 I 115
           +
Sbjct: 768 V 768



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/80 (33%), Positives = 47/80 (58%)
 Frame = -3

Query: 357 YHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALFGDMK 178
           Y+ ++ A C+ G +E+A      M  + + PD+I YT +++GY     + +A  ++ +MK
Sbjct: 397 YNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMK 456

Query: 177 ERGITPDIITYTVLVDGQSK 118
           + G  PDI+TY VL  G S+
Sbjct: 457 DIGHKPDIVTYNVLAGGFSR 476


>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/132 (49%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -3

Query: 393 MLSSVDGPSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNC 214
           +LS+V+ PSK MY K++AA C+AGDM+ AR  FD  ++RG +PD++ YT+M+N YC++NC
Sbjct: 603 LLSNVE-PSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNC 661

Query: 213 LQEAFALFGDMKERGITPDIITYTVLVDGQSK-ISRRRARSHNDIGINRKAKQLASTFWC 37
           LQEA  LF DMK RGI PD+IT+TVL+DG  K    +R  SH   G  +      ST   
Sbjct: 662 LQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSH---GKRKTTSLYVSTILR 718

Query: 36  EMKEMELKPDVI 1
           +M++M++ PDV+
Sbjct: 719 DMEQMKINPDVV 730



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/131 (31%), Positives = 63/131 (48%)
 Frame = -3

Query: 393 MLSSVDGPSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNC 214
           +L+  D   K    KL++  C  GD+EKA    D ML   + P  IMY+ +L   CQ   
Sbjct: 567 LLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGD 626

Query: 213 LQEAFALFGDMKERGITPDIITYTVLVDGQSKISRRRARSHNDIGINRKAKQLASTFWCE 34
           ++ A  LF     RG TPD++TYT++++   +++                 Q A   + +
Sbjct: 627 MKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMN---------------CLQEAHDLFQD 671

Query: 33  MKEMELKPDVI 1
           MK   +KPDVI
Sbjct: 672 MKRRGIKPDVI 682



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/85 (38%), Positives = 48/85 (56%)
 Frame = -3

Query: 357 YHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALFGDMK 178
           Y+ +  A C  G +E A    + M ++ L  D+  YT ++NGYC    L  AF +F +MK
Sbjct: 408 YNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMK 467

Query: 177 ERGITPDIITYTVLVDGQSKISRRR 103
           E+G+ PDI+TY VL  G S+    R
Sbjct: 468 EKGLKPDIVTYNVLAAGLSRNGHAR 492


>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/124 (49%), Positives = 83/124 (66%)
 Frame = -3

Query: 372 PSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFAL 193
           P++ MY KLI AFCR GDM++A+  FD ++ RG++PD+I YTMM+NGYC+VNCL+EA  +
Sbjct: 560 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 619

Query: 192 FGDMKERGITPDIITYTVLVDGQSKISRRRARSHNDIGINRKAKQLASTFWCEMKEMELK 13
           F DMKERGI PD+ITYTV++DG SK +                 Q A   + EM    L+
Sbjct: 620 FNDMKERGIKPDVITYTVVLDGHSKTNN---------------LQDAINLYDEMIARGLQ 664

Query: 12  PDVI 1
           PD++
Sbjct: 665 PDIV 668



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = -3

Query: 366 KTMYHKLIAAFCRAGDMEKARWAFDNMLNRGLSPDLIMYTMMLNGYCQVNCLQEAFALFG 187
           + +Y+ ++ A C+ G +E+A    + M  R +S D++ YT ++ GYC    L +A  +F 
Sbjct: 383 EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFE 442

Query: 186 DMKERGITPDIITYTVLVDGQSK 118
           +MKERGI PDI+TY +LV G S+
Sbjct: 443 EMKERGIEPDIVTYNILVGGFSR 465



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
 Frame = -3

Query: 390 LSSVDGPSKTMYHKLIAAFCRAGDMEKARWAFDNMLNRGL--------SPDLIMYTMMLN 235
           L++++      Y  ++  +C+A    KA   F  +  +G+         P+ IMY  ++ 
Sbjct: 511 LNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIG 570

Query: 234 GYCQVNCLQEAFALFGDMKERGITPDIITYTVLVDGQSKISRRRARSHNDIGINRKAKQL 55
            +C+   ++ A  +F  + ERGITPD+ITYT++++G  +++  R                
Sbjct: 571 AFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLRE--------------- 615

Query: 54  ASTFWCEMKEMELKPDVI 1
           A   + +MKE  +KPDVI
Sbjct: 616 ARDIFNDMKERGIKPDVI 633