BLASTX nr result

ID: Scutellaria23_contig00020764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020764
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof...   234   2e-59
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof...   234   2e-59
ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|2...   226   4e-57
emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]   221   1e-55
ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana] gi|2780545...   216   4e-54

>ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
          Length = 167

 Score =  234 bits (597), Expect = 2e-59
 Identities = 109/140 (77%), Positives = 123/140 (87%)
 Frame = +3

Query: 228 RKEEAKLLKFMAPSLMAAIIALSPICNPPVSLGRTMDAVRGATLFGQSCIGCHVAGGNII 407
           ++++ K LK +AP LMAA++ALSPICN PVSL +T D  RGA LFG++CIGCH AGGNII
Sbjct: 28  KQKQVKFLKGLAPPLMAAVVALSPICNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNII 87

Query: 408 QPGATLFSDDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGPRLQEDDIKLL 587
           QPGATLF  DLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFG RLQE++IKLL
Sbjct: 88  QPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLL 147

Query: 588 AEFVKSQADQGWPKIEIEGE 647
           AEFVK QADQGWP +EI G+
Sbjct: 148 AEFVKLQADQGWPNLEISGD 167


>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
           gi|297737964|emb|CBI27165.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  234 bits (597), Expect = 2e-59
 Identities = 109/140 (77%), Positives = 123/140 (87%)
 Frame = +3

Query: 228 RKEEAKLLKFMAPSLMAAIIALSPICNPPVSLGRTMDAVRGATLFGQSCIGCHVAGGNII 407
           ++++ K LK +AP LMAA++ALSPICN PVSL +T D  RGA LFG++CIGCH AGGNII
Sbjct: 34  KQKQVKFLKGLAPPLMAAVVALSPICNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNII 93

Query: 408 QPGATLFSDDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGPRLQEDDIKLL 587
           QPGATLF  DLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFG RLQE++IKLL
Sbjct: 94  QPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLL 153

Query: 588 AEFVKSQADQGWPKIEIEGE 647
           AEFVK QADQGWP +EI G+
Sbjct: 154 AEFVKLQADQGWPNLEISGD 173


>ref|XP_002333234.1| predicted protein [Populus trichocarpa] gi|222835556|gb|EEE73991.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  226 bits (577), Expect = 4e-57
 Identities = 105/137 (76%), Positives = 125/137 (91%)
 Frame = +3

Query: 228 RKEEAKLLKFMAPSLMAAIIALSPICNPPVSLGRTMDAVRGATLFGQSCIGCHVAGGNII 407
           +++E KL+K +A  LMAA++ALSPI N PVSLG+T+D  RGA+LF ++CIGCH AGGNII
Sbjct: 20  KQKEVKLVKSLALPLMAALVALSPIGNTPVSLGQTLDVQRGASLFSRTCIGCHDAGGNII 79

Query: 408 QPGATLFSDDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGPRLQEDDIKLL 587
           QPGATLF+ DLQRNGVDTEEEIYR+TY+GKGRMPGFGE+CTPRGQCTFGPRLQ+++IKLL
Sbjct: 80  QPGATLFTKDLQRNGVDTEEEIYRMTYFGKGRMPGFGESCTPRGQCTFGPRLQDEEIKLL 139

Query: 588 AEFVKSQADQGWPKIEI 638
           A+FVKSQADQGWP IEI
Sbjct: 140 AQFVKSQADQGWPNIEI 156


>emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
          Length = 125

 Score =  221 bits (564), Expect = 1e-55
 Identities = 103/125 (82%), Positives = 112/125 (89%)
 Frame = +3

Query: 273 MAAIIALSPICNPPVSLGRTMDAVRGATLFGQSCIGCHVAGGNIIQPGATLFSDDLQRNG 452
           MAA++ALSPICN PVSL +T D  RGA LFG++CIGCH AGGNIIQPGATLF  DLQRNG
Sbjct: 1   MAAVVALSPICNTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNG 60

Query: 453 VDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGPRLQEDDIKLLAEFVKSQADQGWPKI 632
           VDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFG RLQE++IKLLAEFVK QADQGWP +
Sbjct: 61  VDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNL 120

Query: 633 EIEGE 647
           EI G+
Sbjct: 121 EISGD 125


>ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana]
           gi|27805454|sp|Q93VA3.1|CYC6_ARATH RecName:
           Full=Cytochrome c6, chloroplastic; AltName:
           Full=Cytochrome c-552; Short=Atc6; AltName:
           Full=Cytochrome c-553; AltName: Full=Cytochrome c553;
           AltName: Full=Soluble cytochrome f; Flags: Precursor
           gi|13926305|gb|AAK49619.1|AF372903_1 AT5g45040/K21C13_23
           [Arabidopsis thaliana] gi|16323250|gb|AAL15359.1|
           AT5g45040/K21C13_23 [Arabidopsis thaliana]
           gi|19571824|emb|CAD27418.1| c6 type cytochrome
           [Arabidopsis thaliana] gi|332007810|gb|AED95193.1|
           cytochrome c6 [Arabidopsis thaliana]
          Length = 175

 Score =  216 bits (551), Expect = 4e-54
 Identities = 99/132 (75%), Positives = 115/132 (87%)
 Frame = +3

Query: 246 LLKFMAPSLMAAIIALSPICNPPVSLGRTMDAVRGATLFGQSCIGCHVAGGNIIQPGATL 425
           LLK +AP L A ++A+SPIC PP SLG+T+D  RGATLF ++CIGCH  GGNIIQPGATL
Sbjct: 44  LLKKLAPPLTAVLLAVSPICFPPESLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATL 103

Query: 426 FSDDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGPRLQEDDIKLLAEFVKS 605
           F+ DL+RNGVDTEEEIYRVTY+GKGRMPGFGE CTPRGQCTFGPRLQ+++IKLLAEFVK 
Sbjct: 104 FTKDLERNGVDTEEEIYRVTYFGKGRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKF 163

Query: 606 QADQGWPKIEIE 641
           QADQGWP +  +
Sbjct: 164 QADQGWPTVSTD 175


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