BLASTX nr result

ID: Scutellaria23_contig00020730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020730
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|...   114   2e-23
ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|...   113   4e-23
ref|XP_002532749.1| conserved hypothetical protein [Ricinus comm...   113   4e-23
gb|ACJ83941.1| unknown [Medicago truncatula]                          111   2e-22

>ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|222843524|gb|EEE81071.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  117 bits (293), Expect = 2e-24
 Identities = 70/150 (46%), Positives = 91/150 (60%)
 Frame = -2

Query: 513 GDTPKRLARHSVGSDRSTDXXXXXXXXXXXXXXXXXXXXXSWERKGATSDGGSHGLAPST 334
           G+  KR AR+S+GS+ S +                      WE  G  S+ GSHG    T
Sbjct: 126 GEAHKRPARYSIGSENSMEQSPIHNHARISGRNSGAPSPS-WE--GKNSNDGSHG----T 178

Query: 333 PGRSRLRSVTRGDDSPDRGPAVPKFGEWDETDPAAAEGYTQVFNKVREEKHSETGKVPPI 154
           PGRSRLR   +GD+SPD+G AVPKFG+WDE +P++A+GYT +FNKVREEK    GK+P  
Sbjct: 179 PGRSRLRP--KGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREEKQIGEGKMPG- 235

Query: 153 MPAESLSHSTPHKHYANDNAKGCGCFMWGK 64
           MP ES S++   K   +D+AK C CF WG+
Sbjct: 236 MPTES-SNAYVRKQTPSDSAK-CCCFPWGR 263


>ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|ACU24535.1| unknown
           [Glycine max] gi|300079889|gb|ADJ67470.1| RIN4d protein
           [Glycine max]
          Length = 248

 Score =  114 bits (284), Expect = 2e-23
 Identities = 75/202 (37%), Positives = 92/202 (45%)
 Frame = -2

Query: 666 PNPPEVVRPRHDXXXXXXXXXXXRLCDSPLRHEAGAXXXXXXXXXXXXXSAGDTPKRLAR 487
           P+    VR  H+           +  DSP RH  G               + D  KR +R
Sbjct: 67  PSGKGSVRTTHELQKSREDGDPKQFTDSPARHGGG-----DSSHRGHGVGSADNRKRPSR 121

Query: 486 HSVGSDRSTDXXXXXXXXXXXXXXXXXXXXXSWERKGATSDGGSHGLAPSTPGRSRLRSV 307
            S G + + D                      WE  G  S   SHG    TPGRSRLR  
Sbjct: 122 QSTGPEHNIDRSPLHRQAKTPGRDSPS-----WE--GKNSYDSSHG----TPGRSRLRPS 170

Query: 306 TRGDDSPDRGPAVPKFGEWDETDPAAAEGYTQVFNKVREEKHSETGKVPPIMPAESLSHS 127
            RGD++PD G AVPKFGEWDE++PA+A+GYT +FNKVREEK    G VP        +  
Sbjct: 171 YRGDETPDEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQYA-- 228

Query: 126 TPHKHYANDNAKGCGCFMWGKR 61
                 AND A+ C CF WGK+
Sbjct: 229 -ARNQRANDKAQSC-CFCWGKK 248


>ref|NP_001235235.1| RIN4c protein [Glycine max] gi|300079887|gb|ADJ67469.1| RIN4c
           protein [Glycine max]
          Length = 246

 Score =  113 bits (282), Expect = 4e-23
 Identities = 75/202 (37%), Positives = 93/202 (46%)
 Frame = -2

Query: 666 PNPPEVVRPRHDXXXXXXXXXXXRLCDSPLRHEAGAXXXXXXXXXXXXXSAGDTPKRLAR 487
           P+    VR  H+           +  DSP RH                  + D  KR +R
Sbjct: 65  PSGKGSVRSIHELQMSREDGDPKQFTDSPARHGGS-----DSAYRGHGVGSADNRKRPSR 119

Query: 486 HSVGSDRSTDXXXXXXXXXXXXXXXXXXXXXSWERKGATSDGGSHGLAPSTPGRSRLRSV 307
            S GS+ S D                      WE  G  S   SHG    TPGRSRLR  
Sbjct: 120 QSTGSEHSIDRSPLHRQAKTPGRDSPS-----WE--GKNSYDSSHG----TPGRSRLRPP 168

Query: 306 TRGDDSPDRGPAVPKFGEWDETDPAAAEGYTQVFNKVREEKHSETGKVPPIMPAESLSHS 127
            RGD++PD+G AVPKFGEWDE++PA+A+GYT +FNKVREEK    G VP        +  
Sbjct: 169 NRGDETPDKGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPVTPNGRQYA-- 226

Query: 126 TPHKHYANDNAKGCGCFMWGKR 61
                 A+D A+ C CF WGK+
Sbjct: 227 -ARNQPADDKAQSC-CFCWGKK 246


>ref|XP_002532749.1| conserved hypothetical protein [Ricinus communis]
           gi|223527526|gb|EEF29651.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 227

 Score =  113 bits (282), Expect = 4e-23
 Identities = 75/206 (36%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
 Frame = -2

Query: 666 PNPPEVVRPRHDXXXXXXXXXXXRLCDSPLRHE----AGAXXXXXXXXXXXXXSAGDTPK 499
           P     VR  H+           +  DSP+RH+      +              +   P 
Sbjct: 34  PTGQGAVRRAHERQRSREDGDLRQFTDSPVRHDNINRRDSAPQRYGGRGVSYGESHKRPG 93

Query: 498 RLARHSVGSDRSTDXXXXXXXXXXXXXXXXXXXXXSWERKGATSDGGSHGLAPSTPGRSR 319
           R +  S+GSD S +                      WE KG+     SHG    TPGRSR
Sbjct: 94  RQSAQSIGSDNSLEQSPLHHKAKISGRGSGAPSPA-WEGKGSYES--SHG----TPGRSR 146

Query: 318 LRSVTRGDDSPDRGPAVPKFGEWDETDPAAAEGYTQVFNKVREEKHSETGKVPPIMPAES 139
           L+   +GD+SPD+G AVPKFGEWDE +PA+A+GYT +FNKVREE+    GKVP  MP ES
Sbjct: 147 LKP--KGDESPDKGAAVPKFGEWDENNPASADGYTHIFNKVREERQIGAGKVPG-MPTES 203

Query: 138 LSHSTPHKHYANDNAKGCGCFMWGKR 61
             + T  K  +++++K C CF WG++
Sbjct: 204 -PYRTSRKPTSSNSSKSC-CFPWGRK 227


>gb|ACJ83941.1| unknown [Medicago truncatula]
          Length = 248

 Score =  111 bits (277), Expect = 2e-22
 Identities = 58/110 (52%), Positives = 69/110 (62%)
 Frame = -2

Query: 390 WERKGATSDGGSHGLAPSTPGRSRLRSVTRGDDSPDRGPAVPKFGEWDETDPAAAEGYTQ 211
           WE  G ++   SHG    TPGRSRLR V R D+ PD+  AVPKFGEWDE+DPA+A+GYT 
Sbjct: 149 WE--GKSTYDSSHG----TPGRSRLRPVNRDDEIPDKSAAVPKFGEWDESDPASADGYTH 202

Query: 210 VFNKVREEKHSETGKVPPIMPAESLSHSTPHKHYANDNAKGCGCFMWGKR 61
           +FNKVREEKH   G  P      S          AND A+GC CF WG++
Sbjct: 203 IFNKVREEKHVAAGNTPGTPNGRSY---VIRNQPANDKAQGC-CFFWGRK 248


Top