BLASTX nr result

ID: Scutellaria23_contig00020708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020708
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX20031.1| RING-finger protein [Capsicum annuum]                  107   1e-21
ref|XP_002873665.1| hypothetical protein ARALYDRAFT_488284 [Arab...   105   3e-21
gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...   105   4e-21
ref|NP_196946.1| E3 ubiquitin-protein ligase RGLG2 [Arabidopsis ...   102   2e-20
dbj|BAH19894.1| AT5G14420 [Arabidopsis thaliana]                      100   1e-19

>gb|AAX20031.1| RING-finger protein [Capsicum annuum]
          Length = 484

 Score =  107 bits (267), Expect = 1e-21
 Identities = 70/146 (47%), Positives = 84/146 (57%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 MGNKSSSPRNGGDWRQAXXXXXXXXSGWQHDYAQSSVSQYAQNYPVQHPYPEGYPQTEQY 251
           MG KSS   +   WRQ                 +SS +QY   YP  H     YPQ + Y
Sbjct: 1   MGGKSSREDS---WRQTSS-------------TRSSWNQY--EYPPTHSSSPSYPQ-DSY 41

Query: 250 NAPPQDYALPQEYTAPSQLPAPVPTQYNVPPPR---THAPQKKLDRRYTRIADDYNSLDE 80
           +   Q  A+P  Y  P      VP+    PP +   +HA + +LDRRY+RIAD+YNSLDE
Sbjct: 42  SYSSQQQAVPS-YAPPPPHQQAVPSYAPAPPQQNYASHASRPRLDRRYSRIADNYNSLDE 100

Query: 79  VTEALARAGLESSNLIIGIDFTKSNE 2
           VTEALARAGLESSNLI+GIDFTKSNE
Sbjct: 101 VTEALARAGLESSNLIVGIDFTKSNE 126


>ref|XP_002873665.1| hypothetical protein ARALYDRAFT_488284 [Arabidopsis lyrata subsp.
           lyrata] gi|297319502|gb|EFH49924.1| hypothetical protein
           ARALYDRAFT_488284 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/112 (50%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328 SSVSQYAQNYPVQHPYPEGYPQTEQYNAPPQDYALPQEYTAPSQLPAPVPTQ-YNVPPPR 152
           SS S  + ++  Q  YP+   ++  Y  PP  YA P EYT    LP    TQ Y+ PP +
Sbjct: 21  SSASPSSSSWASQQSYPQYGAESYNY-PPPPSYAPPPEYTQTQPLPPLYSTQSYSAPPSQ 79

Query: 151 THAP--QKKLDRRYTRIADDYNSLDEVTEALARAGLESSNLIIGIDFTKSNE 2
           ++    +K+L+R+Y++I+DDY+SL++VTEALARAGLESSNLI+GIDFTKSNE
Sbjct: 80  SYGSDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNE 131


>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score =  105 bits (262), Expect = 4e-21
 Identities = 67/145 (46%), Positives = 76/145 (52%)
 Frame = -3

Query: 436 GEMGNKSSSPRNGGDWRQAXXXXXXXXSGWQHDYAQSSVSQYAQNYPVQHPYPEGYPQTE 257
           G +G  SS       W Q               Y       Y+Q Y         Y    
Sbjct: 9   GHLGQSSSFRSTSSSWNQ---------------YENQQQPGYSQPY---------YAPEN 44

Query: 256 QYNAPPQDYALPQEYTAPSQLPAPVPTQYNVPPPRTHAPQKKLDRRYTRIADDYNSLDEV 77
           QY  PPQ     Q Y  P Q P P    Y+VP   TH P+K+LDRRY+RIADDY+SLD+V
Sbjct: 45  QYYQPPQQPPTQQPY--PPQ-PYPPHPSYSVP---THEPKKRLDRRYSRIADDYSSLDQV 98

Query: 76  TEALARAGLESSNLIIGIDFTKSNE 2
           TEALA AGLESSNLI+GIDFTKSNE
Sbjct: 99  TEALAHAGLESSNLIVGIDFTKSNE 123


>ref|NP_196946.1| E3 ubiquitin-protein ligase RGLG2 [Arabidopsis thaliana]
           gi|30684895|ref|NP_850818.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana]
           gi|42573365|ref|NP_974779.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana]
           gi|42573367|ref|NP_974780.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana]
           gi|75181029|sp|Q9LY87.1|RGLG2_ARATH RecName: Full=E3
           ubiquitin-protein ligase RGLG2; AltName: Full=RING
           domain ligase 2 gi|7573467|emb|CAB87781.1| putative
           protein [Arabidopsis thaliana]
           gi|20466262|gb|AAM20448.1| putative protein [Arabidopsis
           thaliana] gi|23198082|gb|AAN15568.1| putative protein
           [Arabidopsis thaliana] gi|70905105|gb|AAZ14078.1|
           At5g14420 [Arabidopsis thaliana]
           gi|332004645|gb|AED92028.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana] gi|332004646|gb|AED92029.1|
           E3 ubiquitin-protein ligase RGLG2 [Arabidopsis thaliana]
           gi|332004647|gb|AED92030.1| E3 ubiquitin-protein ligase
           RGLG2 [Arabidopsis thaliana] gi|332004648|gb|AED92031.1|
           E3 ubiquitin-protein ligase RGLG2 [Arabidopsis thaliana]
          Length = 468

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/116 (49%), Positives = 79/116 (68%), Gaps = 7/116 (6%)
 Frame = -3

Query: 328 SSVSQYAQNYPVQHPYPEGYPQTEQYNAPPQDYALPQEYTAP-----SQLPAPVPTQYNV 164
           SS S  + ++  Q  YP+   ++  Y  PP  YA P EYT P     S  P   P+ Y+ 
Sbjct: 21  SSASPSSSSWASQQSYPQYGAESYNY-PPPPSYAQPPEYTQPPPPLYSTQPYSAPS-YSA 78

Query: 163 PPPRTHAP--QKKLDRRYTRIADDYNSLDEVTEALARAGLESSNLIIGIDFTKSNE 2
           PP +++    +K+L+R+Y++I+DDY+SL++VTEALARAGLESSNLI+GIDFTKSNE
Sbjct: 79  PPSQSYGSDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNE 134


>dbj|BAH19894.1| AT5G14420 [Arabidopsis thaliana]
          Length = 468

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
 Frame = -3

Query: 328 SSVSQYAQNYPVQHPYPEGYPQTEQYNAPPQDYALPQEYTAP-----SQLPAPVPTQYNV 164
           SS S  + ++  Q  YP+   ++  Y  PP  YA P EYT P     S  P   P+ Y+ 
Sbjct: 21  SSASPSSSSWASQQSYPQYGAESYNY-PPPPSYAQPPEYTQPPPPLYSTQPYSAPS-YSA 78

Query: 163 PPPRTHAP--QKKLDRRYTRIADDYNSLDEVTEALARAGLESSNLIIGIDFTKSNE 2
           PP +++    +K+L+R+Y++I+DDY+S ++VTEALARAGLESSNLI+GIDFTKSNE
Sbjct: 79  PPSQSYGSDNKKRLERKYSKISDDYSSWEQVTEALARAGLESSNLIVGIDFTKSNE 134


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