BLASTX nr result

ID: Scutellaria23_contig00020672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020672
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN07899.1| 20S proteasome alpha 6 subunit [Nicotiana bentham...   106   1e-42
ref|XP_004167042.1| PREDICTED: proteasome subunit alpha type-1-A...   108   2e-40
ref|XP_004152689.1| PREDICTED: proteasome subunit alpha type-1-A...   107   4e-40
ref|XP_002510414.1| proteasome subunit alpha type, putative [Ric...   109   1e-39
gb|ABK92956.1| unknown [Populus trichocarpa] gi|118483175|gb|ABK...   110   2e-39

>gb|AAN07899.1| 20S proteasome alpha 6 subunit [Nicotiana benthamiana]
          Length = 274

 Score =  106 bits (265), Expect(2) = 1e-42
 Identities = 51/71 (71%), Positives = 56/71 (78%)
 Frame = +1

Query: 13  VGTQRSWKRPYXXXXXXXXXXESGAHLYYNCPSGDYFEYQAFAIASWSQAAKTYLERKFQ 192
           V TQRSWKRPY          ESGAHLYYNCPSG+YFEYQAFAI S SQAAKTYLER+F+
Sbjct: 118 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 177

Query: 193 GFMDSSRDNLV 225
            FMDSSR+ L+
Sbjct: 178 TFMDSSRETLL 188



 Score = 92.0 bits (227), Expect(2) = 1e-42
 Identities = 46/65 (70%), Positives = 55/65 (84%)
 Frame = +3

Query: 225 ALFALRETLQGEKLTSLICTISVVGVGEAFHVLDQETVQSLINELEVVDEEPPSDVAAAP 404
           ALFALRETLQGEKLTS  CT++VVGVGEAFH+LD+ET+Q+LINE E+  EE P   AAAP
Sbjct: 191 ALFALRETLQGEKLTSTNCTVAVVGVGEAFHMLDKETIQALINEFEIAGEEAP---AAAP 247

Query: 405 EQEGS 419
           ++ GS
Sbjct: 248 DEAGS 252


>ref|XP_004167042.1| PREDICTED: proteasome subunit alpha type-1-A-like [Cucumis sativus]
          Length = 167

 Score =  108 bits (270), Expect(2) = 2e-40
 Identities = 52/74 (70%), Positives = 56/74 (75%)
 Frame = +1

Query: 4   MVHVGTQRSWKRPYXXXXXXXXXXESGAHLYYNCPSGDYFEYQAFAIASWSQAAKTYLER 183
           M  V TQRSWKRPY          ESGAHLYYNCPSG+YFEYQAFAI S SQAAKTYLER
Sbjct: 1   MSQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER 60

Query: 184 KFQGFMDSSRDNLV 225
           +F+ F DSSRD L+
Sbjct: 61  RFENFKDSSRDELI 74



 Score = 82.4 bits (202), Expect(2) = 2e-40
 Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
 Frame = +3

Query: 225 ALFALRETLQGEKLTSLICTISVVGVGEAFHVLDQETVQSLINELEVV--DEEPPSDVAA 398
           AL A RETLQGEKLTS ICTI+++GVGE FH+LD+ETVQ LI+E E+V  D+ P  D   
Sbjct: 77  ALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKEDDVPAVDQDI 136

Query: 399 APEQEGS 419
           APEQ  S
Sbjct: 137 APEQGDS 143


>ref|XP_004152689.1| PREDICTED: proteasome subunit alpha type-1-A-like [Cucumis sativus]
          Length = 281

 Score =  107 bits (267), Expect(2) = 4e-40
 Identities = 51/71 (71%), Positives = 55/71 (77%)
 Frame = +1

Query: 13  VGTQRSWKRPYXXXXXXXXXXESGAHLYYNCPSGDYFEYQAFAIASWSQAAKTYLERKFQ 192
           V TQRSWKRPY          ESGAHLYYNCPSG+YFEYQAFAI S SQAAKTYLER+F+
Sbjct: 118 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 177

Query: 193 GFMDSSRDNLV 225
            F DSSRD L+
Sbjct: 178 NFKDSSRDELI 188



 Score = 82.4 bits (202), Expect(2) = 4e-40
 Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
 Frame = +3

Query: 225 ALFALRETLQGEKLTSLICTISVVGVGEAFHVLDQETVQSLINELEVV--DEEPPSDVAA 398
           AL A RETLQGEKLTS ICTI+++GVGE FH+LD+ETVQ LI+E E+V  D+ P  D   
Sbjct: 191 ALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKEDDVPAVDQDI 250

Query: 399 APEQEGS 419
           APEQ  S
Sbjct: 251 APEQGDS 257


>ref|XP_002510414.1| proteasome subunit alpha type, putative [Ricinus communis]
           gi|223551115|gb|EEF52601.1| proteasome subunit alpha
           type, putative [Ricinus communis]
          Length = 283

 Score =  109 bits (272), Expect(2) = 1e-39
 Identities = 51/71 (71%), Positives = 57/71 (80%)
 Frame = +1

Query: 13  VGTQRSWKRPYXXXXXXXXXXESGAHLYYNCPSGDYFEYQAFAIASWSQAAKTYLERKFQ 192
           V TQRSWKRPY          ESGAHLYYNCPSG+YFEYQAFAI S SQAAKTY+ER+F+
Sbjct: 118 VCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYMERRFE 177

Query: 193 GFMDSSRDNLV 225
            FMDSSRD+L+
Sbjct: 178 NFMDSSRDDLI 188



 Score = 79.0 bits (193), Expect(2) = 1e-39
 Identities = 42/66 (63%), Positives = 48/66 (72%)
 Frame = +3

Query: 225 ALFALRETLQGEKLTSLICTISVVGVGEAFHVLDQETVQSLINELEVVDEEPPSDVAAAP 404
           AL A+RETLQGE L S ICT++VVGVGEAFHVLDQETVQ LI+  E+V E  P   AA P
Sbjct: 191 ALIAVRETLQGETLKSSICTVAVVGVGEAFHVLDQETVQQLIDAFEIVGE--PEAPAAEP 248

Query: 405 EQEGSG 422
           +    G
Sbjct: 249 DAAAEG 254


>gb|ABK92956.1| unknown [Populus trichocarpa] gi|118483175|gb|ABK93492.1| unknown
           [Populus trichocarpa]
          Length = 274

 Score =  110 bits (274), Expect(2) = 2e-39
 Identities = 52/71 (73%), Positives = 57/71 (80%)
 Frame = +1

Query: 13  VGTQRSWKRPYXXXXXXXXXXESGAHLYYNCPSGDYFEYQAFAIASWSQAAKTYLERKFQ 192
           V TQRSWKRPY          ESGAHLYYNCPSG+YFEYQAFAI S SQAAKTYLER+F+
Sbjct: 118 VCTQRSWKRPYGVGLLVGGTDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 177

Query: 193 GFMDSSRDNLV 225
            FMDSSRD+L+
Sbjct: 178 NFMDSSRDDLI 188



 Score = 77.4 bits (189), Expect(2) = 2e-39
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = +3

Query: 225 ALFALRETLQGEKLTSLICTISVVGVGEAFHVLDQETVQSLINELEVVDEEPPSDVAAAP 404
           AL A+RETLQGE L S ICT++VVGV EAFH+LDQETVQ LIN  E+V E   ++  AA 
Sbjct: 191 ALIAVRETLQGETLKSSICTVAVVGVDEAFHILDQETVQQLINAFEIVGE---TEAGAAE 247

Query: 405 EQEGS 419
           E+ G+
Sbjct: 248 EEAGA 252


Top