BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020459
         (1476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   575   e-162
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]        556   e-156
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   537   e-150
ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   536   e-150
ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis t...   523   e-146

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  575 bits (1483), Expect = e-162
 Identities = 293/441 (66%), Positives = 348/441 (78%), Gaps = 7/441 (1%)
 Frame = -3

Query: 1474 GVTHLIELSLDVKVPADWVKVNSTKKTIRYHPPEVLNALDQLTLANEELSVVCRATWDEF 1295
            G THLIEL +DVKVP++WVKVNSTKKT+RYHPPEVL+ALDQL+LANEEL + CR  WD F
Sbjct: 678  GTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVLSALDQLSLANEELMIACRGAWDSF 737

Query: 1294 LKTFGGCYSEFQAAVQALATLDCLYSLAELSRNKSYVRPVFVSDDEPVQINISCGRHPVM 1115
            L+ F   +SEFQAAVQALATLDCL+SLA LSRNK+YVRPVFV D EPVQ++I  GRHPV+
Sbjct: 738  LRAFDKYFSEFQAAVQALATLDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGRHPVL 797

Query: 1114 ENILQDNFVPNDTNLHADGQYCQIVTGPNMGGKSCYIRQVALIVLMAQVGCFVPAASAKL 935
            E +LQDNFVPNDTNLHADG+YC+IVTGPNMGGKSCYIRQVALI +MAQVG FVPA+SAKL
Sbjct: 798  ETVLQDNFVPNDTNLHADGEYCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKL 857

Query: 934  HVMDGIYTRMGASDSIQLGKSTFLEELSEASHILQNCSSRSLVIIDELGRGTSTHDGVAI 755
             V+DGI+TRMG+SDSIQ G+STFLEELSEASHI+ NC+SRSLVIIDELGRGTSTHDGVAI
Sbjct: 858  CVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSLVIIDELGRGTSTHDGVAI 917

Query: 754  AYATLHYFLKYKRCMLLFVTHYPEIVGIRNEFPGSVGAYHVSYLTPEKDTDLELD----- 590
            AYATLHY L++KRCM+LFVTHYP+IV ++NEFPGSVGAYHVSY+  ++  D++ D     
Sbjct: 918  AYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQRAMDMDTDTDKTD 977

Query: 589  --PDQEMDTVNHGDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRAVMMAARLEVEVC 416
               D+   T++H DVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRA +MAA LE  + 
Sbjct: 978  SKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAELEAMIV 1037

Query: 415  KREKKKLLENNSVFNDKLDNAKDACVPLDCLQTATVNNLEDVEKAFRDLFFHLNLVVHRE 236
             R K     N+S       + +   +   C +   +   ED   A R+ F  L   +   
Sbjct: 1038 SRVK-----NSSAQKTLQGSQQSISIQSGCSRAEQIGLEED---ACREFFLDLKSALGNA 1089

Query: 235  EEMAKTLYNLKHAQSLANELV 173
            +   ++L  LKHA+S+A EL+
Sbjct: 1090 DP-ERSLQFLKHARSIAKELI 1109


>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 846

 Score =  556 bits (1434), Expect = e-156
 Identities = 278/441 (63%), Positives = 345/441 (78%), Gaps = 5/441 (1%)
 Frame = -3

Query: 1474 GVTHLIELSLDVKVPADWVKVNSTKKTIRYHPPEVLNALDQLTLANEELSVVCRATWDEF 1295
            G+THLIEL LD KVP DWVKV+STKK IRYHP EV+ ALD+L LANE+L+V+CR+ W+ F
Sbjct: 406  GITHLIELPLDTKVPPDWVKVSSTKKAIRYHPSEVVVALDELALANEQLTVICRSAWNNF 465

Query: 1294 LKTFGGCYSEFQAAVQALATLDCLYSLAELSRNKSYVRPVFVSDDEPVQINISCGRHPVM 1115
            L  FGG ++EFQAAVQALA+LDCL SLA LSRNK+YVRP+FV DDE VQI+I  GRHPV+
Sbjct: 466  LAGFGGYFAEFQAAVQALASLDCLNSLAILSRNKNYVRPLFVKDDEAVQIHICSGRHPVL 525

Query: 1114 ENILQDNFVPNDTNLHADGQYCQIVTGPNMGGKSCYIRQVALIVLMAQVGCFVPAASAKL 935
            E +LQDNFV NDT+LHA+ +YCQIVTGPNMGGKSCYIRQVALI LMAQVG FVPA SAKL
Sbjct: 526  ETVLQDNFVSNDTDLHAEREYCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPAFSAKL 585

Query: 934  HVMDGIYTRMGASDSIQLGKSTFLEELSEASHILQNCSSRSLVIIDELGRGTSTHDGVAI 755
            HV+DGIYTRMGASDSIQ G+STFLEELSEAS IL+ CS+ SLVI+DELGRGTSTHDGVAI
Sbjct: 586  HVLDGIYTRMGASDSIQQGRSTFLEELSEASDILKKCSASSLVILDELGRGTSTHDGVAI 645

Query: 754  AYATLHYFLKYKRCMLLFVTHYPEIVGIRNEFPGSVGAYHVSYLTPEKDTDLELDPDQEM 575
            A+ATL Y L++K+CM+LFVTHYPEIV ++NEFPGSVG YHVSYLT + D   +   +++M
Sbjct: 646  AFATLQYLLEHKKCMVLFVTHYPEIVSVKNEFPGSVGPYHVSYLTSQGDVTGDCRSNEKM 705

Query: 574  DTVNHGDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRAVMMAARLEVEVCKREKKKL 395
            + +N  D+TYLYKL PGV+ERSFGFKVAQLAQLP +CI+RA+++A RLE  VC   ++  
Sbjct: 706  NYINSEDITYLYKLAPGVAERSFGFKVAQLAQLPVACIQRAIVIAGRLEAAVCNYTEQSR 765

Query: 394  LENNSVFNDKLDNAKDACVPLDCLQ-----TATVNNLEDVEKAFRDLFFHLNLVVHREEE 230
            +  +   N + D  K +    D L+       +VN +++  + +R+LF ++N  +  E  
Sbjct: 766  IRRSYSINYRQDGCKSSEPVDDVLEPYLSSAGSVNCIDNSSELYRELFLNINFALLEENG 825

Query: 229  MAKTLYNLKHAQSLANELVKR 167
              +    L  A+SLA +L+ R
Sbjct: 826  GDRRFQFLMQAKSLAAQLISR 846


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  537 bits (1384), Expect = e-150
 Identities = 280/440 (63%), Positives = 335/440 (76%), Gaps = 4/440 (0%)
 Frame = -3

Query: 1474 GVTHLIELSLDVKVPADWVKVNSTKKTIRYHPPEVLNALDQLTLANEELSVVCRATWDEF 1295
            G THLIEL  DVKVP +WVK+NSTKK IRYHPPEVL ALDQL LANEEL VVCRA WD F
Sbjct: 669  GTTHLIELPADVKVPLNWVKINSTKKMIRYHPPEVLTALDQLALANEELMVVCRAAWDSF 728

Query: 1294 LKTFGGCYSEFQAAVQALATLDCLYSLAELSRNKSYVRPVFVSDDEPVQINISCGRHPVM 1115
            L++F   Y+EFQA +QALA LDCL+SLA LS+NK+YVRPVFV D+EPVQI+IS GRHPV+
Sbjct: 729  LRSFAKHYAEFQAVIQALAALDCLHSLAILSKNKNYVRPVFVDDNEPVQIHISSGRHPVL 788

Query: 1114 ENILQDNFVPNDTNLHADGQYCQIVTGPNMGGKSCYIRQVALIVLMAQVGCFVPAASAKL 935
            E IL DNFVPNDT LH DG++CQ+VTGPNMGGKSCYIRQVALIV+MAQVG FVPA+SAKL
Sbjct: 789  ETILLDNFVPNDTCLHVDGEHCQVVTGPNMGGKSCYIRQVALIVMMAQVGSFVPASSAKL 848

Query: 934  HVMDGIYTRMGASDSIQLGKSTFLEELSEASHILQNCSSRSLVIIDELGRGTSTHDGVAI 755
            HV+DGIYTRMGASDSIQ G+STFLEELSE SHIL+ C+  SLVIIDELGRGTSTHDG AI
Sbjct: 849  HVLDGIYTRMGASDSIQQGRSTFLEELSETSHILRKCTGYSLVIIDELGRGTSTHDGEAI 908

Query: 754  AYATLHYFLKYKRCMLLFVTHYPEIVGIRNEFPGSVGAYHVSYLTPEKDTDLELDPDQEM 575
            AYATL + L+ KRCM+LFVTHYP+I  IR  F  SVGAYHVSYL  EK+ D     D + 
Sbjct: 909  AYATLCHLLEQKRCMVLFVTHYPKIANIRTGFLNSVGAYHVSYLMAEKNNDA---TDSKF 965

Query: 574  DTVNHGDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRAVMMAARLEVEVCKREKKKL 395
            D   + DVTYLYKLVPGVSERSFGFKVAQLAQLP+SCI RA +MAARLE  +  R + +L
Sbjct: 966  D---NEDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARLEEAISCRIRNRL 1022

Query: 394  LENNSVFNDKLDNAKDACVPL----DCLQTATVNNLEDVEKAFRDLFFHLNLVVHREEEM 227
             ++  +   ++D  ++    +           + N E++   +   F +    +  ++  
Sbjct: 1023 DKSQLLKALQIDQLQEIQEKIPESPGNFHDKRIENYEELNNTYEKFFLNFKSALLGDD-- 1080

Query: 226  AKTLYNLKHAQSLANELVKR 167
            AK+   L++A+S+A  L+KR
Sbjct: 1081 AKSFQYLENARSIARALIKR 1100


>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  536 bits (1381), Expect = e-150
 Identities = 282/441 (63%), Positives = 335/441 (75%), Gaps = 5/441 (1%)
 Frame = -3

Query: 1474 GVTHLIELSLDVKVPADWVKVNSTKKTIRYHPPEVLNALDQLTLANEELSVVCRATWDEF 1295
            G THLIELS DVKVP++WVKVNSTKKTIRYHPPEVL  LD+L+LA EEL+V CRA W+ F
Sbjct: 645  GTTHLIELSTDVKVPSNWVKVNSTKKTIRYHPPEVLTTLDKLSLAKEELTVACRAAWNNF 704

Query: 1294 LKTFGGCYSEFQAAVQALATLDCLYSLAELSRNKSYVRPVFVSDDEPVQINISCGRHPVM 1115
            L  F   Y+EFQAAVQALA LDCL+SLA LSRNK YV PVFV D EPVQI IS GRHPV+
Sbjct: 705  LTDFSKHYAEFQAAVQALAALDCLHSLAILSRNKGYVCPVFVDDHEPVQIQISSGRHPVL 764

Query: 1114 ENILQDNFVPNDTNLHADGQYCQIVTGPNMGGKSCYIRQVALIVLMAQVGCFVPAASAKL 935
            E  LQDNFVPNDTN+HADG+YCQIVTGPNMGGKSCYIRQVALIV+MAQVG FVPA+SAKL
Sbjct: 765  ETTLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYIRQVALIVIMAQVGSFVPASSAKL 824

Query: 934  HVMDGIYTRMGASDSIQLGKSTFLEELSEASHILQNCSSRSLVIIDELGRGTSTHDGVAI 755
            HV+D IYTRMGASDSIQLG+STFLEELSE SHIL +C+  SLVIIDELGRGTSTHDG+AI
Sbjct: 825  HVLDRIYTRMGASDSIQLGRSTFLEELSETSHILNSCTEHSLVIIDELGRGTSTHDGMAI 884

Query: 754  AYATLHYFLKYKRCMLLFVTHYPEIVGIRNEFPGSVGAYHVSYLTPEKDTDLELDPDQEM 575
            A+ATLHY LK KR M+LFVTHYP+I  +  EFPGSV AYHVS+L         +  D   
Sbjct: 885  AHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHL---------ISHDASK 935

Query: 574  DTVNHGDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRAVMMAARLEV----EVCKRE 407
            ++    DVTYLYKLVPGVSERSFGFKVAQLAQLPS CI RA++MA++LE      +  R 
Sbjct: 936  NSNLDHDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRS 995

Query: 406  KKKLLENNSVFNDKLDNAKDACVPLDCLQTATVNNLEDVEKAFRDLFFHLNL-VVHREEE 230
             K+LL +  V   + +           +  +     ++ + A++D  F+LNL     +++
Sbjct: 996  TKELLLDTLVIGQEKE---------QLMAQSLDRPHKEFDMAYKD--FYLNLKAATEDDD 1044

Query: 229  MAKTLYNLKHAQSLANELVKR 167
             AK+ + L+HA+S+A +L+ R
Sbjct: 1045 WAKSFHLLEHARSIAKKLIGR 1065


>ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
            gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
            mismatch repair protein MSH3; Short=AtMSH3; AltName:
            Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
            Msh3 protein [Arabidopsis thaliana]
            gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
            Msh3 [Arabidopsis thaliana]
          Length = 1081

 Score =  523 bits (1346), Expect = e-146
 Identities = 273/433 (63%), Positives = 323/433 (74%)
 Frame = -3

Query: 1474 GVTHLIELSLDVKVPADWVKVNSTKKTIRYHPPEVLNALDQLTLANEELSVVCRATWDEF 1295
            G+THLIEL +D KVP +WVKVNSTKKTIRYHPPE++  LD+L LA E L++V RA+WD F
Sbjct: 671  GITHLIELPVDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSF 730

Query: 1294 LKTFGGCYSEFQAAVQALATLDCLYSLAELSRNKSYVRPVFVSDDEPVQINISCGRHPVM 1115
            LK+F   Y++F+AAVQALA LDCL+SL+ LSRNK+YVRP FV D EPV+INI  GRHPV+
Sbjct: 731  LKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVL 790

Query: 1114 ENILQDNFVPNDTNLHADGQYCQIVTGPNMGGKSCYIRQVALIVLMAQVGCFVPAASAKL 935
            E ILQDNFVPNDT LHA+G+YCQI+TGPNMGGKSCYIRQVALI +MAQVG FVPA+ AKL
Sbjct: 791  ETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKL 850

Query: 934  HVMDGIYTRMGASDSIQLGKSTFLEELSEASHILQNCSSRSLVIIDELGRGTSTHDGVAI 755
            HV+DG++TRMGASDSIQ G+STFLEELSEASHI++ CSSRSLVI+DELGRGTSTHDGVAI
Sbjct: 851  HVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAI 910

Query: 754  AYATLHYFLKYKRCMLLFVTHYPEIVGIRNEFPGSVGAYHVSYLTPEKDTDLELDPDQEM 575
            AYATL + L  KRC++LFVTHYPEI  I N FPGSVG YHVSYLT +KD           
Sbjct: 911  AYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD----------K 960

Query: 574  DTVNHGDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRAVMMAARLEVEVCKREKKKL 395
             + +H DVTYLYKLV G+  RSFGFKVAQLAQ+P SCIRRA+ MAA+LE EV  RE+   
Sbjct: 961  GSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARER--- 1017

Query: 394  LENNSVFNDKLDNAKDACVPLDCLQTATVNNLEDVEKAFRDLFFHLNLVVHREEEMAKTL 215
                   N ++   +    P            E+   A  DLF  L   +  EE+  K  
Sbjct: 1018 -------NTRMGEPEGHEEP---------RGAEESISALGDLFADLKFAL-SEEDPWKAF 1060

Query: 214  YNLKHAQSLANEL 176
              LKHA  +A ++
Sbjct: 1061 EFLKHAWKIAGKI 1073