BLASTX nr result

ID: Scutellaria23_contig00020431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020431
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   199   4e-49
ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi...   186   4e-45
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                         182   4e-44
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...   182   4e-44

>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  199 bits (506), Expect = 4e-49
 Identities = 108/229 (47%), Positives = 147/229 (64%)
 Frame = -1

Query: 688 KLGDIVVVAAIAKTLSKPGGIYSLERDGDSIPLSEDLVLQVLRRGSLDSSEKLDFFRWCS 509
           KLGD+++VA+I+KTLS+ G   +   D +SIP+SE LV+Q+L R S+D   K++FFRWCS
Sbjct: 18  KLGDMLLVASISKTLSERG---TRSPDLESIPISESLVVQILGRNSIDVFRKVEFFRWCS 74

Query: 508 LRQNYKHSAATYAQVFKVVCFLPHQHHDDVLELIASMKRDGVVLNSSTLKMILQKFIRDG 329
            R NYKHS   Y+ +F++VC    +  D V  L++SMK DGVV+   T K++L   IR G
Sbjct: 75  FRHNYKHSVGAYSHIFRIVCRAGAEFLDQVPLLMSSMKDDGVVVGQETFKLLLDSLIRAG 134

Query: 328 KYDSALEVLDYVERXXXXXXXXXXXXXXPVLVALVRKNQITIALSVFLKLLDSSLSSATG 149
           K+DSALE+LD++E                VLVAL+RKNQ+ +AL +F KLL         
Sbjct: 135 KFDSALEILDHIEE---LGTGLNSYVYDSVLVALIRKNQLGLALPLFFKLLGGDEGQ--- 188

Query: 148 NDIVIPDAFACNELLVGLRKADMKDEFEQVFTKLHETKLYPMDRHGYNI 2
             + +P++ ACN+LLV LRKADMK EF  VF KL   K + +D  GYNI
Sbjct: 189 GGVPVPESNACNQLLVALRKADMKIEFRNVFEKLRAKKDFDLDTQGYNI 237


>ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|222872045|gb|EEF09176.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  191 bits (485), Expect = 1e-46
 Identities = 106/233 (45%), Positives = 153/233 (65%), Gaps = 5/233 (2%)
 Frame = -1

Query: 685 LGDIVVVAAIAKTLSKPGGIYSLERDGDSIPLSEDLVLQVLRRGSLDSSEKLDFFRWCSL 506
           +G+I++VA + KTLS+ G   +   D DSIPLSE LVLQ+LRR SLDSS+K++FF+WCS+
Sbjct: 1   MGNILLVAYLTKTLSESG---TRSLDPDSIPLSESLVLQILRRNSLDSSKKMEFFKWCSV 57

Query: 505 RQNYKHSAATYAQVFKVVCFLPHQHHDDVLELIASMKRDGVVLNSSTLKMILQKFIRDGK 326
           R  YKHS +TY+Q+F  +C     + ++V +L+ SMK DGVV+ S T K++L  FIR GK
Sbjct: 58  RHIYKHSVSTYSQMFSTLC--RSGYLEEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGK 115

Query: 325 YDSALEVLDYVERXXXXXXXXXXXXXXPVLVALVRKNQITIALSVFLKLLDSSLSSATGN 146
           +DSAL++LD++E                ++VAL +KNQ+ +ALS+  KLL++S     GN
Sbjct: 116 FDSALDILDHMEE---LGSNPNPHMYDSIIVALAKKNQVGLALSIMFKLLEAS----DGN 168

Query: 145 D-----IVIPDAFACNELLVGLRKADMKDEFEQVFTKLHETKLYPMDRHGYNI 2
           +     + +P + ACN LLV LR  +MK EF+ VF KL     + ++  GYNI
Sbjct: 169 EENAVGVSLPGSVACNALLVALRNGEMKVEFKTVFAKLRGKVGFELNTWGYNI 221


>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
           gi|449523383|ref|XP_004168703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g01570-like [Cucumis sativus]
          Length = 803

 Score =  186 bits (472), Expect = 4e-45
 Identities = 105/235 (44%), Positives = 149/235 (63%), Gaps = 5/235 (2%)
 Frame = -1

Query: 691 SKLGDIVVVAAIAKTLSKPGGIYSLERDGDSIPLSEDLVLQVLRRGSLDSSEKLDFFRWC 512
           S L  ++++A+I KTLS+ G   +      S+P+S  L+LQ+L   SL+ S KLDFF+WC
Sbjct: 24  SHLSHLLLLASITKTLSESG---TRTLQHHSLPISHPLLLQILHSRSLNPSHKLDFFKWC 80

Query: 511 SLRQNYKHSAATYAQVFKVVCFLPHQHHDDVLELIASMKRDGVVLNSSTLKMILQKFIRD 332
           SL  N+ HS +TY+Q+F ++C   + H  +V  L+ SMKRDGV ++S T K++L  FIR 
Sbjct: 81  SLAPNFNHSPSTYSQIFHILCRSGYLH--EVPPLLDSMKRDGVSVDSHTFKVLLDAFIRS 138

Query: 331 GKYDSALEVLDYVERXXXXXXXXXXXXXXPVLVALVRKNQITIALSVFLKLLD-----SS 167
           GKYD+ALE+LD++E                VLVAL+RKNQ+ +ALS+F KLLD       
Sbjct: 139 GKYDAALEILDHME---DLGTSLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNNGGQ 195

Query: 166 LSSATGNDIVIPDAFACNELLVGLRKADMKDEFEQVFTKLHETKLYPMDRHGYNI 2
           + SA      +P++ ACNELLV LRK DM+ EF++VF KL   + +    +GYNI
Sbjct: 196 VDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNI 250


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score =  182 bits (463), Expect = 4e-44
 Identities = 107/236 (45%), Positives = 154/236 (65%), Gaps = 7/236 (2%)
 Frame = -1

Query: 688 KLGDIVVVAAIAKTLSKPGGIYSLERDGDSIPLSEDLVLQVLRRGSLDSSEKLDFFRWC- 512
           +L ++++VA+++KTLS+ G   +   D +SIP+SE +VLQ+LRR S+D S+KLDFFRWC 
Sbjct: 26  QLCNVLLVASLSKTLSQSG---TRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCY 82

Query: 511 SLRQNYKHSAATYAQVFKVVCFLPHQHHDDVLELIASMKRDGVVLNSSTLKMILQKFIRD 332
           SLR  YKHSA  Y+Q+F+ VC        +V +L+ SMK DGV L+ +  K++L   IR 
Sbjct: 83  SLRPGYKHSATAYSQIFRTVCRTGLL--GEVPDLLGSMKEDGVNLDQTMAKILLDSLIRS 140

Query: 331 GKYDSALEVLDYVERXXXXXXXXXXXXXXPVLVALVRKNQITIALSVFLKLLDSSLSSA- 155
           GK++SAL VLDY+E                VL+ALV+K+++ +ALS+  KLL++S + + 
Sbjct: 141 GKFESALGVLDYMEE---LGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSD 197

Query: 154 --TGNDIVI---PDAFACNELLVGLRKADMKDEFEQVFTKLHETKLYPMDRHGYNI 2
             TG  I++   P   A NELLVGLR+ADM+ EF++VF KL   K +  D   YNI
Sbjct: 198 DDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNI 253


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score =  182 bits (463), Expect = 4e-44
 Identities = 107/236 (45%), Positives = 154/236 (65%), Gaps = 7/236 (2%)
 Frame = -1

Query: 688 KLGDIVVVAAIAKTLSKPGGIYSLERDGDSIPLSEDLVLQVLRRGSLDSSEKLDFFRWC- 512
           +L ++++VA+++KTLS+ G   +   D +SIP+SE +VLQ+LRR S+D S+KLDFFRWC 
Sbjct: 26  QLCNVLLVASLSKTLSQSG---TRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCY 82

Query: 511 SLRQNYKHSAATYAQVFKVVCFLPHQHHDDVLELIASMKRDGVVLNSSTLKMILQKFIRD 332
           SLR  YKHSA  Y+Q+F+ VC        +V +L+ SMK DGV L+ +  K++L   IR 
Sbjct: 83  SLRPGYKHSATAYSQIFRTVCRTGLL--GEVPDLLGSMKEDGVNLDQTMAKILLDSLIRS 140

Query: 331 GKYDSALEVLDYVERXXXXXXXXXXXXXXPVLVALVRKNQITIALSVFLKLLDSSLSSA- 155
           GK++SAL VLDY+E                VL+ALV+K+++ +ALS+  KLL++S + + 
Sbjct: 141 GKFESALGVLDYMEE---LGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSD 197

Query: 154 --TGNDIVI---PDAFACNELLVGLRKADMKDEFEQVFTKLHETKLYPMDRHGYNI 2
             TG  I++   P   A NELLVGLR+ADM+ EF++VF KL   K +  D   YNI
Sbjct: 198 DDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNI 253


Top