BLASTX nr result

ID: Scutellaria23_contig00020302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020302
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding prot...   275   5e-72
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              275   5e-72
ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|2...   274   9e-72
gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum t...   274   1e-71
gb|ACI43571.1| RBP50 [Cucurbita maxima]                               271   8e-71

>ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
           [Vitis vinifera]
          Length = 432

 Score =  275 bits (703), Expect = 5e-72
 Identities = 136/144 (94%), Positives = 140/144 (97%)
 Frame = +3

Query: 219 MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNALQF 398
           M EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSA NA+QF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 399 YTNVQPSIRGRNVYVQFSSHQELTIMDQNAQARGDEPNRILLVTVHHMLYPITVEVLHQV 578
           YTNVQPSIRGRNVYVQFSSHQELT +DQNAQ RGDEPNRILLVT+HH+LYPITVEVLHQV
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILLVTIHHLLYPITVEVLHQV 120

Query: 579 FSPHGFVEKIVTFQKSAGFQALIQ 650
           FSPHGFVEKIVTFQKSAGFQALIQ
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQ 144


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  275 bits (703), Expect = 5e-72
 Identities = 136/144 (94%), Positives = 140/144 (97%)
 Frame = +3

Query: 219 MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNALQF 398
           M EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSA NA+QF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 399 YTNVQPSIRGRNVYVQFSSHQELTIMDQNAQARGDEPNRILLVTVHHMLYPITVEVLHQV 578
           YTNVQPSIRGRNVYVQFSSHQELT +DQNAQ RGDEPNRILLVT+HH+LYPITVEVLHQV
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILLVTIHHLLYPITVEVLHQV 120

Query: 579 FSPHGFVEKIVTFQKSAGFQALIQ 650
           FSPHGFVEKIVTFQKSAGFQALIQ
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQ 144


>ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|222843893|gb|EEE81440.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  274 bits (701), Expect = 9e-72
 Identities = 135/144 (93%), Positives = 139/144 (96%)
 Frame = +3

Query: 219 MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNALQF 398
           M EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSA+NALQ 
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINALQL 60

Query: 399 YTNVQPSIRGRNVYVQFSSHQELTIMDQNAQARGDEPNRILLVTVHHMLYPITVEVLHQV 578
           YTN+QP+IRGRNVYVQFSSHQELT MDQN Q RGDEPNRILLVT+HHMLYPITVEVLHQV
Sbjct: 61  YTNIQPTIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 579 FSPHGFVEKIVTFQKSAGFQALIQ 650
           FSPHGFVEKIVTFQKSAGFQALIQ
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQ 144


>gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
          Length = 441

 Score =  274 bits (700), Expect = 1e-71
 Identities = 135/144 (93%), Positives = 141/144 (97%)
 Frame = +3

Query: 219 MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNALQF 398
           M++PSKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAV ALQF
Sbjct: 1   MSDPSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVKALQF 60

Query: 399 YTNVQPSIRGRNVYVQFSSHQELTIMDQNAQARGDEPNRILLVTVHHMLYPITVEVLHQV 578
           Y+NVQPSIRGRNVYVQFSSHQELT MDQNAQ RGDEPNRILLVT+HHMLYPITV+VLHQV
Sbjct: 61  YSNVQPSIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVDVLHQV 120

Query: 579 FSPHGFVEKIVTFQKSAGFQALIQ 650
           FSPHGFVEKIVTFQKSAGFQALIQ
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQ 144


>gb|ACI43571.1| RBP50 [Cucurbita maxima]
          Length = 445

 Score =  271 bits (693), Expect = 8e-71
 Identities = 135/144 (93%), Positives = 138/144 (95%)
 Frame = +3

Query: 219 MAEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNALQF 398
           M EPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQAL+QMQDVPSAVNALQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 399 YTNVQPSIRGRNVYVQFSSHQELTIMDQNAQARGDEPNRILLVTVHHMLYPITVEVLHQV 578
           + NVQPSIRGRNVYVQFSSHQELT  DQNAQ RGDEPNRILLVT+HHMLYPITVEVLHQV
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 579 FSPHGFVEKIVTFQKSAGFQALIQ 650
           F PHGFVEKIVTFQKSAGFQALIQ
Sbjct: 121 FFPHGFVEKIVTFQKSAGFQALIQ 144


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