BLASTX nr result
ID: Scutellaria23_contig00020171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria23_contig00020171
(1333 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABB86262.1| unknown [Solanum tuberosum] 450 e-124
ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put... 312 1e-82
ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleop... 310 4e-82
ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleop... 310 7e-82
ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleop... 305 2e-80
>gb|ABB86262.1| unknown [Solanum tuberosum]
Length = 364
Score = 450 bits (1157), Expect = e-124
Identities = 226/367 (61%), Positives = 268/367 (73%), Gaps = 4/367 (1%)
Frame = +2
Query: 62 MFYRGKYLDSGDAREMGLKRQRLMDRGPSYY----GAXXXXXXXXXXXXXXXXXXXXXXX 229
M+YRG Y+DSGDAREMG KRQR+MD+G SYY G+
Sbjct: 1 MYYRGNYMDSGDAREMGFKRQRIMDQGSSYYATPPGSSYMYNPPPPPPPPSYSYHGQPPP 60
Query: 230 XXVVRLRGLPFDCAEAEIVDFFHGLDVIDVLFVHKGGKFTGEAYCVLGYPLQIDFALQRN 409
VVRLRGLPFDC+E EI DF HGLDV+DVL VHKGG+FTGEAYCVLGYPLQ+DFALQRN
Sbjct: 61 FPVVRLRGLPFDCSETEIADFLHGLDVVDVLLVHKGGRFTGEAYCVLGYPLQVDFALQRN 120
Query: 410 RQNIGRRYVEVFRSRKDEYYKAIANEVFDXXXXXXXXXXXXXXXXDERDLSEFKGVLRLR 589
RQNIGRRYVEVFRS+K+EYYKAIANEV+D + + L E GVL LR
Sbjct: 121 RQNIGRRYVEVFRSKKEEYYKAIANEVYD---SRGGSVPRARSADESKTLPEHTGVLWLR 177
Query: 590 GLPFSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSKDRMTL 769
GLPFSASKEDI+DFFKDF + E +H+ A EGRP GEAFVEFA+ ++SR AM+KDRMT+
Sbjct: 178 GLPFSASKEDIIDFFKDFELPEKSIHITATFEGRPTGEAFVEFASADDSRAAMAKDRMTI 237
Query: 770 GYRYIELFPXXXXXXXXXXXXXXXMPKSFEGKDATEPTAVLRMRGLPFSAGKDDVIDFFK 949
G RYIELF + K +G+D E T++LRMRGLPFSAGKDD++DFFK
Sbjct: 238 GNRYIELFASSSEELEEAVSRGRVLEKPVDGRDPNEVTSILRMRGLPFSAGKDDIMDFFK 297
Query: 950 NYSLSEESIHITFNFEGRPTGEAFVEFGSADDAKAALGKDRMTLGSRYIELFQSSPEELN 1129
+++L+E++IH+TF +GRPTGEAFVEF S DDAKAAL KDRMTLGSRY+ELF SS E++N
Sbjct: 298 DFALTEDAIHVTFLSDGRPTGEAFVEFASTDDAKAALAKDRMTLGSRYVELFPSSIEDMN 357
Query: 1130 EAVSRGR 1150
A+SRGR
Sbjct: 358 HAISRGR 364
>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
communis] gi|223547409|gb|EEF48904.1| heterogeneous
nuclear ribonucleoprotein, putative [Ricinus communis]
Length = 260
Score = 312 bits (799), Expect = 1e-82
Identities = 153/245 (62%), Positives = 180/245 (73%)
Frame = +2
Query: 62 MFYRGKYLDSGDAREMGLKRQRLMDRGPSYYGAXXXXXXXXXXXXXXXXXXXXXXXXXVV 241
MFYRG+Y D GD REMG KRQRL+D+GPSYYG VV
Sbjct: 4 MFYRGRYPDGGDGREMGAKRQRLVDQGPSYYGTSPGPSFMYNPPPYGYVAQPPPFP--VV 61
Query: 242 RLRGLPFDCAEAEIVDFFHGLDVIDVLFVHKGGKFTGEAYCVLGYPLQIDFALQRNRQNI 421
RLRGLPFDC E ++ +FFHGLD++DVLFVHKGGKFTGEA+CVLG PLQ+DFALQ+NRQN+
Sbjct: 62 RLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEAFCVLGCPLQVDFALQKNRQNM 121
Query: 422 GRRYVEVFRSRKDEYYKAIANEVFDXXXXXXXXXXXXXXXXDERDLSEFKGVLRLRGLPF 601
GRRYVEVFRS++ +YYKAIANEV D + +D +E GVLRLRGLPF
Sbjct: 122 GRRYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEHTGVLRLRGLPF 181
Query: 602 SASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSKDRMTLGYRY 781
SA K+DI++FFKDF +SED VH+ NSEGRP GEAFVEFA+ E+S+ AM+KDRMTLG RY
Sbjct: 182 SAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMTLGSRY 241
Query: 782 IELFP 796
IELFP
Sbjct: 242 IELFP 246
Score = 185 bits (469), Expect = 3e-44
Identities = 103/204 (50%), Positives = 131/204 (64%), Gaps = 12/204 (5%)
Frame = +2
Query: 575 VLRLRGLPFSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSK 754
V+RLRGLPF ++ D+ +FF I + L + G+ GEAF P + A+ K
Sbjct: 60 VVRLRGLPFDCTETDVAEFFHGLDIVDV---LFVHKGGKFTGEAFCVLGCPLQVDFALQK 116
Query: 755 DRMTLGYRYIELF-----------PXXXXXXXXXXXXXXXMPKSF-EGKDATEPTAVLRM 898
+R +G RY+E+F KS+ EGKD+ E T VLR+
Sbjct: 117 NRQNMGRRYVEVFRSKRQDYYKAIANEVSDARGGSPRRAPRAKSYDEGKDSAEHTGVLRL 176
Query: 899 RGLPFSAGKDDVIDFFKNYSLSEESIHITFNFEGRPTGEAFVEFGSADDAKAALGKDRMT 1078
RGLPFSAGKDD+++FFK++ LSE+S+HIT N EGRPTGEAFVEF SA+D+KAA+ KDRMT
Sbjct: 177 RGLPFSAGKDDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMT 236
Query: 1079 LGSRYIELFQSSPEELNEAVSRGR 1150
LGSRYIELF SS EEL EAV+RGR
Sbjct: 237 LGSRYIELFPSSIEELEEAVTRGR 260
>ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
sativus] gi|449502606|ref|XP_004161690.1| PREDICTED: LOW
QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein
F-like [Cucumis sativus]
Length = 260
Score = 310 bits (795), Expect = 4e-82
Identities = 152/246 (61%), Positives = 179/246 (72%), Gaps = 1/246 (0%)
Frame = +2
Query: 62 MFYRGKYLDSGDAREMGLKRQRLMDRGPSYYGAXXXXXXXXXXXXXXXXXXXXXXXXXVV 241
MFYRG Y D GD REMG KRQR++D+G SYYG VV
Sbjct: 3 MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFP--VV 60
Query: 242 RLRGLPFDCAEAEIVDFFHGLDVIDVLFVHKGGKFTGEAYCVLGYPLQIDFALQRNRQNI 421
RLRGLPFDC E ++V+FFHGLD++D+LFVHK GKFTGE +CVLGYPLQ+DFALQRNRQN+
Sbjct: 61 RLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNM 120
Query: 422 GRRYVEVFRSRKDEYYKAIANEVFDXXXXXXXXXXXXXXXXDE-RDLSEFKGVLRLRGLP 598
GRRYVE+FRS + EYYKA+ANEVFD DE +D +E GVLRLRGLP
Sbjct: 121 GRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLP 180
Query: 599 FSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSKDRMTLGYR 778
+SA K+DI+DFFK F +SED +HL NSEGRP+GEAFVEF+N ++S+ AMSKDRMTLG R
Sbjct: 181 YSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSR 240
Query: 779 YIELFP 796
YIELFP
Sbjct: 241 YIELFP 246
Score = 177 bits (449), Expect = 5e-42
Identities = 98/205 (47%), Positives = 128/205 (62%), Gaps = 13/205 (6%)
Frame = +2
Query: 575 VLRLRGLPFSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSK 754
V+RLRGLPF + D+V+FF I + L + G+ GE F P + A+ +
Sbjct: 59 VVRLRGLPFDCMETDVVEFFHGLDIVDI---LFVHKNGKFTGEGFCVLGYPLQVDFALQR 115
Query: 755 DRMTLGYRYIELFPXXXXXXXXXXXXXXX----------MPKSF---EGKDATEPTAVLR 895
+R +G RY+E+F P+S E KD+ E T VLR
Sbjct: 116 NRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLR 175
Query: 896 MRGLPFSAGKDDVIDFFKNYSLSEESIHITFNFEGRPTGEAFVEFGSADDAKAALGKDRM 1075
+RGLP+SAGKDD++DFFK ++LSE+SIH+T N EGRP+GEAFVEF + D+KAA+ KDRM
Sbjct: 176 LRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRM 235
Query: 1076 TLGSRYIELFQSSPEELNEAVSRGR 1150
TLGSRYIELF SS EEL+EA+SRGR
Sbjct: 236 TLGSRYIELFPSSHEELDEAISRGR 260
>ref|XP_003532209.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Glycine
max]
Length = 260
Score = 310 bits (793), Expect = 7e-82
Identities = 152/246 (61%), Positives = 178/246 (72%), Gaps = 1/246 (0%)
Frame = +2
Query: 62 MFYRGKYLDSGDAREMGLKRQRLMDRGPSYYGAXXXXXXXXXXXXXXXXXXXXXXXXXVV 241
MFYRGK+ D GD REM KRQR +D G S+YGA VV
Sbjct: 1 MFYRGKFADGGDGREMAAKRQRTVDPGSSFYGASTGSNFMYNPSPYGYVSQPPPPPFPVV 60
Query: 242 RLRGLPFDCAEAEIVDFFHGLDVIDVLFVHKGGKFTGEAYCVLGYPLQIDFALQRNRQNI 421
RLRGLPFDC E ++ +FFHGLD++DVLFVHKGGKFTGE +CVLGYPLQ+DFALQRNRQN+
Sbjct: 61 RLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEGFCVLGYPLQVDFALQRNRQNM 120
Query: 422 GRRYVEVFRSRKDEYYKAIANEVFDXXXXXXXXXXXXXXXXDE-RDLSEFKGVLRLRGLP 598
GRRYVEVFRS++ EYYKAIANEV D DE +D +E GVLRLRGLP
Sbjct: 121 GRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAEHTGVLRLRGLP 180
Query: 599 FSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSKDRMTLGYR 778
FSASK+DI++FFKDF + ED +H+I NSEGRP+GEA+ EFA+ E+S+ AM KDRMTLG R
Sbjct: 181 FSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFASAEDSKAAMVKDRMTLGSR 240
Query: 779 YIELFP 796
YIELFP
Sbjct: 241 YIELFP 246
Score = 172 bits (436), Expect = 2e-40
Identities = 95/205 (46%), Positives = 126/205 (61%), Gaps = 13/205 (6%)
Frame = +2
Query: 575 VLRLRGLPFSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSK 754
V+RLRGLPF ++ D+ +FF I + L + G+ GE F P + A+ +
Sbjct: 59 VVRLRGLPFDCTETDVAEFFHGLDIVDV---LFVHKGGKFTGEGFCVLGYPLQVDFALQR 115
Query: 755 DRMTLGYRYIELFPXXXXXXXXXXXXXXX------------MPKSF-EGKDATEPTAVLR 895
+R +G RY+E+F KS+ EGKD+ E T VLR
Sbjct: 116 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDARGGSPRRSASRAKSYDEGKDSAEHTGVLR 175
Query: 896 MRGLPFSAGKDDVIDFFKNYSLSEESIHITFNFEGRPTGEAFVEFGSADDAKAALGKDRM 1075
+RGLPFSA KDD+++FFK++ L E+SIHI N EGRP+GEA+ EF SA+D+KAA+ KDRM
Sbjct: 176 LRGLPFSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFASAEDSKAAMVKDRM 235
Query: 1076 TLGSRYIELFQSSPEELNEAVSRGR 1150
TLGSRYIELF SSP E+ EA+SRGR
Sbjct: 236 TLGSRYIELFPSSPGEMEEAISRGR 260
>ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
vinifera]
Length = 258
Score = 305 bits (781), Expect = 2e-80
Identities = 152/246 (61%), Positives = 179/246 (72%), Gaps = 1/246 (0%)
Frame = +2
Query: 62 MFYRGKYLDSGDAREMGLKRQRLMDRGPSYYGAXXXXXXXXXXXXXXXXXXXXXXXXXVV 241
MFYRGKY D D R+MG KRQR+ D+G S+YG VV
Sbjct: 1 MFYRGKYADGLDGRDMGPKRQRITDQGSSFYGGSPGSNFMYNASPYSYIGQPPPFP--VV 58
Query: 242 RLRGLPFDCAEAEIVDFFHGLDVIDVLFVHKGGKFTGEAYCVLGYPLQIDFALQRNRQNI 421
RLRGLPFDC+EA++ +FFH LD++DVLFVHK G+FTGEA+CVLGYPLQ++FALQRNRQN+
Sbjct: 59 RLRGLPFDCSEADVAEFFHSLDIVDVLFVHKNGRFTGEAFCVLGYPLQVEFALQRNRQNM 118
Query: 422 GRRYVEVFRSRKDEYYKAIANEVFDXXXXXXXXXXXXXXXXDE-RDLSEFKGVLRLRGLP 598
GRRYVEVFRS++ EYYKAIANEV D DE ++ +E GVLRLRGLP
Sbjct: 119 GRRYVEVFRSKRQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAEHTGVLRLRGLP 178
Query: 599 FSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSKDRMTLGYR 778
FSASKEDI+DFFKDF +SED +H+ NSEGRP GEAFVEF N E+S+ AM+KDRMTLG R
Sbjct: 179 FSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSR 238
Query: 779 YIELFP 796
YIELFP
Sbjct: 239 YIELFP 244
Score = 181 bits (458), Expect = 5e-43
Identities = 101/205 (49%), Positives = 131/205 (63%), Gaps = 13/205 (6%)
Frame = +2
Query: 575 VLRLRGLPFSASKEDIVDFFKDFAISEDKVHLIANSEGRPAGEAFVEFANPEESRTAMSK 754
V+RLRGLPF S+ D+ +FF I + L + GR GEAF P + A+ +
Sbjct: 57 VVRLRGLPFDCSEADVAEFFHSLDIVDV---LFVHKNGRFTGEAFCVLGYPLQVEFALQR 113
Query: 755 DRMTLGYRYIELFPXXXXXXXXXXXXXXX----------MPKSF---EGKDATEPTAVLR 895
+R +G RY+E+F PK+ EGK++ E T VLR
Sbjct: 114 NRQNMGRRYVEVFRSKRQEYYKAIANEVSDTRGGSPRRTAPKAKSNDEGKESAEHTGVLR 173
Query: 896 MRGLPFSAGKDDVIDFFKNYSLSEESIHITFNFEGRPTGEAFVEFGSADDAKAALGKDRM 1075
+RGLPFSA K+D++DFFK++ LSE+SIH+T N EGRPTGEAFVEF +A+D+KAA+ KDRM
Sbjct: 174 LRGLPFSASKEDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRM 233
Query: 1076 TLGSRYIELFQSSPEELNEAVSRGR 1150
TLGSRYIELF SS EEL+EAV+RGR
Sbjct: 234 TLGSRYIELFPSSLEELDEAVARGR 258
Score = 58.9 bits (141), Expect = 3e-06
Identities = 34/99 (34%), Positives = 56/99 (56%)
Frame = +2
Query: 845 PKSFEGKDATEPTAVLRMRGLPFSAGKDDVIDFFKNYSLSEESIHITFNFEGRPTGEAFV 1024
P S+ G+ P V+R+RGLPF + DV +FF + + + + + GR TGEAF
Sbjct: 45 PYSYIGQPP--PFPVVRLRGLPFDCSEADVAEFFHSLDIVDV---LFVHKNGRFTGEAFC 99
Query: 1025 EFGSADDAKAALGKDRMTLGSRYIELFQSSPEELNEAVS 1141
G + AL ++R +G RY+E+F+S +E +A++
Sbjct: 100 VLGYPLQVEFALQRNRQNMGRRYVEVFRSKRQEYYKAIA 138