BLASTX nr result

ID: Scutellaria23_contig00020146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020146
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249...    89   5e-16
ref|NP_188884.1| 50S ribosomal protein L18-like protein [Arabido...    86   2e-15
ref|XP_002883368.1| structural constituent of ribosome [Arabidop...    86   2e-15
ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802...    77   1e-12

>ref|XP_002311628.1| predicted protein [Populus trichocarpa] gi|222851448|gb|EEE88995.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
 Frame = +3

Query: 3   LMDDATWHVSSSLADAWRGNHGNTTSRTRSHFTDHEYGDDNVVSSVDSNEQDPDFDEIHD 182
           L+DD  W VSSSL  AWRG      +++       ++ D      V S + +PDFDEI +
Sbjct: 78  LVDDDAWQVSSSLVHAWRGLDREKEAKSVIEAFGEQFDD------VKSLQGNPDFDEIDN 131

Query: 183 MRIRGKLFYKLDKESKEYEEHKFDFHGKKSTRNERALKNS--KEKGKKEASN 332
           MRIRG LFYKLD++SKE+EE+ FDFH K S R +   K +  KE  KK  S+
Sbjct: 132 MRIRGNLFYKLDRDSKEFEEYSFDFHRKNSWRRKDDPKGNEKKESSKKNESS 183


>ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249372 [Vitis vinifera]
           gi|297737055|emb|CBI26256.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/109 (45%), Positives = 64/109 (58%)
 Frame = +3

Query: 3   LMDDATWHVSSSLADAWRGNHGNTTSRTRSHFTDHEYGDDNVVSSVDSNEQDPDFDEIHD 182
           L+D  TW VSS LA AWR   G +  R      D +      +    S E D DFDEI D
Sbjct: 81  LVDPDTWRVSSGLAQAWRD--GPSGRRVVKGAVDEQ------IHESPSFEADLDFDEIED 132

Query: 183 MRIRGKLFYKLDKESKEYEEHKFDFHGKKSTRNERALKNSKEKGKKEAS 329
           MRI G LFYKLD++SKE+EE+  DFH KKS++N+   K SK++   + S
Sbjct: 133 MRIYGSLFYKLDRDSKEFEEYNLDFHRKKSSKNKGDKKESKKENPTQNS 181


>ref|NP_188884.1| 50S ribosomal protein L18-like protein [Arabidopsis thaliana]
           gi|11994277|dbj|BAB01460.1| unnamed protein product
           [Arabidopsis thaliana] gi|60547769|gb|AAX23848.1|
           hypothetical protein At3g22450 [Arabidopsis thaliana]
           gi|71905479|gb|AAZ52717.1| expressed protein
           [Arabidopsis thaliana] gi|71905481|gb|AAZ52718.1|
           expressed protein [Arabidopsis thaliana]
           gi|332643120|gb|AEE76641.1| 50S ribosomal protein
           L18-like protein [Arabidopsis thaliana]
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/109 (40%), Positives = 63/109 (57%)
 Frame = +3

Query: 6   MDDATWHVSSSLADAWRGNHGNTTSRTRSHFTDHEYGDDNVVSSVDSNEQDPDFDEIHDM 185
           +DD  WHVSSSL+ AWR    +T   +              V     +++DPD DEI +M
Sbjct: 52  VDDDVWHVSSSLSQAWRQFQADTAKNSPVTIQG--------VRETILDDEDPDHDEIDNM 103

Query: 186 RIRGKLFYKLDKESKEYEEHKFDFHGKKSTRNERALKNSKEKGKKEASN 332
           RIRG LF+KLD+ SKE+EE+ +DFH K   +N +  +N +E+ K +  N
Sbjct: 104 RIRGDLFFKLDRGSKEFEEYNYDFHRKNQHKNAKKEQNQEEETKIKKDN 152


>ref|XP_002883368.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297329208|gb|EFH59627.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/109 (40%), Positives = 63/109 (57%)
 Frame = +3

Query: 6   MDDATWHVSSSLADAWRGNHGNTTSRTRSHFTDHEYGDDNVVSSVDSNEQDPDFDEIHDM 185
           +DD  WHVSSSL+ AWR    +T   +              V     +++DPD DEI +M
Sbjct: 52  VDDDAWHVSSSLSQAWRQFQADTAKNSPVTIQG--------VRETMLDDEDPDHDEIDNM 103

Query: 186 RIRGKLFYKLDKESKEYEEHKFDFHGKKSTRNERALKNSKEKGKKEASN 332
           RIRG LFYKLD+ SKE+EE+ +DFH K   +N +  +N +E+   + +N
Sbjct: 104 RIRGDLFYKLDRGSKEFEEYNYDFHRKNQHKNVKREQNQEEETTMKKNN 152


>ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802391 [Glycine max]
          Length = 329

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/118 (36%), Positives = 65/118 (55%)
 Frame = +3

Query: 3   LMDDATWHVSSSLADAWRGNHGNTTSRTRSHFTDHEYGDDNVVSSVDSNEQDPDFDEIHD 182
           L+D   W VSS +A AWR      T+      T  E  DD+V       E + DF++I +
Sbjct: 71  LVDHDAWAVSSGVAQAWREPASRATTSFGPQVTG-EALDDHV-------EGELDFEDIDN 122

Query: 183 MRIRGKLFYKLDKESKEYEEHKFDFHGKKSTRNERALKNSKEKGKKEASNHTMASMVE 356
           MR+RG LFYKL++ SKE+EE+  DFH KKS++ +  +  +K      + +H +  + E
Sbjct: 123 MRVRGNLFYKLERSSKEFEEYNLDFHRKKSSKRKEEVNKAKTTPNVVSKDHKLPKVDE 180


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