BLASTX nr result

ID: Scutellaria23_contig00020019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00020019
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519367.1| replication factor C / DNA polymerase III ga...   127   9e-28
ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242...   115   4e-24
emb|CAN80768.1| hypothetical protein VITISV_013865 [Vitis vinifera]   115   4e-24
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212...   114   1e-23

>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223541434|gb|EEF42984.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1270

 Score =  127 bits (319), Expect = 9e-28
 Identities = 77/155 (49%), Positives = 92/155 (59%), Gaps = 23/155 (14%)
 Frame = +2

Query: 8   LSLGRDDLMNLVHNSDDSNEDCYCYSEDLKSESAVSPLLVRLKNKRWSH---------RK 160
           L LGR+D    V  SDD+ +  Y  SEDL+  S  SPLL++LK+KRWSH         RK
Sbjct: 203 LGLGREDS---VEQSDDTED--YSNSEDLRKISGASPLLIKLKHKRWSHSPSKLLRISRK 257

Query: 161 EDDSIWYSTPALSTSSYNRY------------DSTGSLNXXXXXXXXXXXXPGRQGCGIP 304
           ED S  YSTPALSTSSYNRY             +T S+N            PGRQGCGIP
Sbjct: 258 EDSSYTYSTPALSTSSYNRYCNHNPSTVGSWDGTTASVNDGDDEVDDHLDLPGRQGCGIP 317

Query: 305 CYWSRRSTPKSRN--GSSCSPSLSDALRMKRSTML 403
           CYWS+R TP+ R   GS CSPSLSD ++ K ++ML
Sbjct: 318 CYWSKR-TPRHRGVCGSCCSPSLSDTIQRKGTSML 351


>ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|222840649|gb|EEE78196.1|
           predicted protein [Populus trichocarpa]
          Length = 1241

 Score =  117 bits (292), Expect = 1e-24
 Identities = 75/156 (48%), Positives = 88/156 (56%), Gaps = 24/156 (15%)
 Frame = +2

Query: 8   LSLGRDDLMNLVHNSDDSNEDCYCYSEDLKSESAVSPLLVRLKNKRWSH---------RK 160
           L LGRD +   V  SDD+ E  Y  SEDL+  S  SPLL++LK+K WSH         RK
Sbjct: 216 LGLGRDAI---VEQSDDTEE--YSNSEDLRKISGASPLLLKLKHKNWSHSPSKFLRTSRK 270

Query: 161 EDDSIWYSTPALSTSSYNRYDS------------TGSLNXXXXXXXXXXXXPGRQGCGIP 304
           ED S  +STPALSTSS N+Y +            T S+N            PGR GCGIP
Sbjct: 271 EDSSYCHSTPALSTSSCNKYRNRNPSTVGSWDATTTSMNDGDDEDGDHLDLPGRHGCGIP 330

Query: 305 CYWSRRSTPKSR---NGSSCSPSLSDALRMKRSTML 403
           CYWS+R TP+ R     S CSPSLSD LR K S+ML
Sbjct: 331 CYWSKR-TPRYRGVCGSSCCSPSLSDTLRRKGSSML 365


>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
          Length = 1274

 Score =  115 bits (288), Expect = 4e-24
 Identities = 74/155 (47%), Positives = 85/155 (54%), Gaps = 25/155 (16%)
 Frame = +2

Query: 14  LGRDDLMNLVHNSDDSNEDCYCYSEDLKSESAVSPLLVRLKNKRWSH---------RKED 166
           LGRDD    V  SDD+ E  Y  SED +     SPLL RL+ + WS          RK+D
Sbjct: 192 LGRDDS---VEQSDDTEE--YYNSEDFRRICEASPLLSRLRQRNWSRSSSRLLRSKRKDD 246

Query: 167 DSIWYSTPALSTSSYNRYDS------------TGSLNXXXXXXXXXXXXPGRQGCGIPCY 310
            S  YSTPALSTSSYN Y +            T SL+            PGRQGCGIPCY
Sbjct: 247 SSYSYSTPALSTSSYNPYGNRNPSTVESWDGTTASLHDGDDEVDDQLDLPGRQGCGIPCY 306

Query: 311 WSRRSTPKSR----NGSSCSPSLSDALRMKRSTML 403
           WSRRSTP+ R    +GS  SPSLSD +R K S+ML
Sbjct: 307 WSRRSTPRHRGICGSGSCDSPSLSDTIRRKGSSML 341


>emb|CAN80768.1| hypothetical protein VITISV_013865 [Vitis vinifera]
          Length = 785

 Score =  115 bits (288), Expect = 4e-24
 Identities = 74/155 (47%), Positives = 85/155 (54%), Gaps = 25/155 (16%)
 Frame = +2

Query: 14  LGRDDLMNLVHNSDDSNEDCYCYSEDLKSESAVSPLLVRLKNKRWSH---------RKED 166
           LGRDD    V  SDD+ E  Y  SED +     SPLL RL+ + WS          RK+D
Sbjct: 194 LGRDDS---VEQSDDTEE--YYNSEDFRRICEASPLLSRLRQRNWSRSSSRLLRSKRKDD 248

Query: 167 DSIWYSTPALSTSSYNRYDS------------TGSLNXXXXXXXXXXXXPGRQGCGIPCY 310
            S  YSTPALSTSSYN Y +            T SL+            PGRQGCGIPCY
Sbjct: 249 SSYSYSTPALSTSSYNPYGNRNPSTVESWDGTTASLHDGDDEVDDQLDLPGRQGCGIPCY 308

Query: 311 WSRRSTPKSR----NGSSCSPSLSDALRMKRSTML 403
           WSRRSTP+ R    +GS  SPSLSD +R K S+ML
Sbjct: 309 WSRRSTPRHRGICGSGSCDSPSLSDTIRRKGSSML 343


>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
           gi|449478091|ref|XP_004155220.1| PREDICTED:
           uncharacterized protein LOC101227259 [Cucumis sativus]
          Length = 1267

 Score =  114 bits (284), Expect = 1e-23
 Identities = 70/143 (48%), Positives = 84/143 (58%), Gaps = 22/143 (15%)
 Frame = +2

Query: 41  VHNSDDSNEDCYCYSEDLKSESAVSPLLVRLKNKRW--------SHRKEDDSIWYSTPAL 196
           +  SDD+ +  Y  SED +  SA SPLL++LK+K +        + RKED S  YSTPAL
Sbjct: 236 IEQSDDTED--YSNSEDFRRYSAASPLLLKLKHKSFHPSSKFLRNSRKEDSSYSYSTPAL 293

Query: 197 STSSYNRY------------DSTGSLNXXXXXXXXXXXXPGRQGCGIPCYWSRRSTPKSR 340
           STSSYNRY             +T S+N            PGRQGCGIPCYWS+R TPK R
Sbjct: 294 STSSYNRYVNRNPSTVGSWDGTTTSINDADDEVDDRLDFPGRQGCGIPCYWSKR-TPKHR 352

Query: 341 N--GSSCSPSLSDALRMKRSTML 403
              GS CSPSLSD LR K S++L
Sbjct: 353 GICGSCCSPSLSDTLRRKGSSIL 375


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