BLASTX nr result

ID: Scutellaria23_contig00019971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019971
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301581.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002531688.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
emb|CBI28417.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249...    79   3e-13
ref|NP_178586.4| nucleoporin, Nup133/Nup155-like protein [Arabid...    76   3e-12

>ref|XP_002301581.1| predicted protein [Populus trichocarpa] gi|222843307|gb|EEE80854.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/75 (54%), Positives = 51/75 (68%)
 Frame = +3

Query: 3   LLKEESKEQNKNTLMTLCSNLLSIAKRHEGYQTMWSICXXXXXXXXXXXXMHESMGPKGG 182
           +L   + E ++  L  L SNLLSI+KRHEGY TMWSIC            MH+SMGPKGG
Sbjct: 254 VLNVRTDEPDEEILRKLTSNLLSISKRHEGYNTMWSICCDINDSALLRNLMHDSMGPKGG 313

Query: 183 FTCFVFKQLYERKQL 227
           F+ FVFKQLYE++Q+
Sbjct: 314 FSYFVFKQLYEKRQI 328


>ref|XP_002531688.1| conserved hypothetical protein [Ricinus communis]
            gi|223528664|gb|EEF30679.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1391

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/69 (55%), Positives = 45/69 (65%)
 Frame = +3

Query: 18   SKEQNKNTLMTLCSNLLSIAKRHEGYQTMWSICXXXXXXXXXXXXMHESMGPKGGFTCFV 197
            + EQN      L S+LL IAKRHEGY TMWSIC            M+ESMGP GGF+ FV
Sbjct: 1029 TNEQNDELQRKLSSSLLGIAKRHEGYNTMWSICCDLNDAILLKNLMNESMGPNGGFSYFV 1088

Query: 198  FKQLYERKQ 224
            FKQLY+++Q
Sbjct: 1089 FKQLYQKRQ 1097


>emb|CBI28417.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/71 (54%), Positives = 47/71 (66%)
 Frame = +3

Query: 12   EESKEQNKNTLMTLCSNLLSIAKRHEGYQTMWSICXXXXXXXXXXXXMHESMGPKGGFTC 191
            E  +EQ +  L  L S+LLSIAKRHEGY T+W+IC            MHESMGPK GF+ 
Sbjct: 890  EGIEEQKEVILKKLSSSLLSIAKRHEGYLTLWNICCDLNDAVLLRNIMHESMGPKAGFSY 949

Query: 192  FVFKQLYERKQ 224
            FVF+QLYE +Q
Sbjct: 950  FVFRQLYESRQ 960


>ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249432 isoform 1 [Vitis
            vinifera]
          Length = 1330

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/71 (54%), Positives = 47/71 (66%)
 Frame = +3

Query: 12   EESKEQNKNTLMTLCSNLLSIAKRHEGYQTMWSICXXXXXXXXXXXXMHESMGPKGGFTC 191
            E  +EQ +  L  L S+LLSIAKRHEGY T+W+IC            MHESMGPK GF+ 
Sbjct: 965  EGIEEQKEVILKKLSSSLLSIAKRHEGYLTLWNICCDLNDAVLLRNIMHESMGPKAGFSY 1024

Query: 192  FVFKQLYERKQ 224
            FVF+QLYE +Q
Sbjct: 1025 FVFRQLYESRQ 1035


>ref|NP_178586.4| nucleoporin, Nup133/Nup155-like protein [Arabidopsis thaliana]
            gi|330250802|gb|AEC05896.1| nucleoporin,
            Nup133/Nup155-like protein [Arabidopsis thaliana]
          Length = 1285

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = +3

Query: 6    LKEESKEQNKNTLMTLCSNLLSIAKRHEGYQTMWSICXXXXXXXXXXXXMHESMGPKGGF 185
            ++E ++  +++     CSNL+SIAKRH GY+ MW IC            MHE +GP+GGF
Sbjct: 926  IRERTEATDEDIFRNRCSNLISIAKRHAGYKIMWKICYDLNDTGLLRNLMHEGVGPQGGF 985

Query: 186  TCFVFKQLYERKQ 224
            + FVF+QLY+ KQ
Sbjct: 986  SYFVFQQLYDMKQ 998


Top