BLASTX nr result

ID: Scutellaria23_contig00019957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019957
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511689.1| DNA repair and recombination protein radA, p...   130   1e-28
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   130   1e-28
ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ...   125   5e-27
ref|XP_002320055.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]              124   1e-26

>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/88 (69%), Positives = 72/88 (81%)
 Frame = -2

Query: 264 PGIGKTQLGIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQIAEACAQDMLEYYNL 85
           PGIGKTQLGIQLAVN QIP   GGLGGKA+YIDTEGSFMVER LQ+AEA  +DMLEY   
Sbjct: 115 PGIGKTQLGIQLAVNVQIPPYCGGLGGKAVYIDTEGSFMVERVLQVAEASVEDMLEYSRF 174

Query: 84  LRKDSPACRLDKQAKDFLDNIFYFRICT 1
           LR+D   C++  Q+KD L+NI+YFR+C+
Sbjct: 175 LRRDLQTCQVATQSKDILENIYYFRVCS 202


>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/88 (70%), Positives = 73/88 (82%)
 Frame = -2

Query: 264 PGIGKTQLGIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQIAEACAQDMLEYYNL 85
           PGIGKTQLGIQLAVN QIP + GGLGGKAIYIDTEGSFM+ER+LQIAEAC +DM    + 
Sbjct: 115 PGIGKTQLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDF 174

Query: 84  LRKDSPACRLDKQAKDFLDNIFYFRICT 1
           L+KD  +C++  Q KDFL NIFYFR+C+
Sbjct: 175 LQKDFQSCQVKAQPKDFLQNIFYFRVCS 202


>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
           sativus] gi|449480051|ref|XP_004155785.1| PREDICTED: DNA
           repair protein RAD51 homolog 3-like [Cucumis sativus]
          Length = 346

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/88 (68%), Positives = 73/88 (82%)
 Frame = -2

Query: 264 PGIGKTQLGIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQIAEACAQDMLEYYNL 85
           PGIGKTQLGIQLAVN QIP   GG+GGKA+YIDTEGSFMVERALQIAEAC +DM +Y  L
Sbjct: 115 PGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVL 174

Query: 84  LRKDSPACRLDKQAKDFLDNIFYFRICT 1
           L+K++   ++  + KD L+NIFYFR+C+
Sbjct: 175 LKKNAIPHQIQIEPKDILENIFYFRVCS 202


>ref|XP_002320055.1| predicted protein [Populus trichocarpa] gi|222860828|gb|EEE98370.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/88 (69%), Positives = 71/88 (80%)
 Frame = -2

Query: 264 PGIGKTQLGIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQIAEACAQDMLEYYNL 85
           PGIGKTQLGIQLAVN Q+P+  GGLGGKAIYIDTEGSFM ERA +IAEAC +D+ EY   
Sbjct: 52  PGIGKTQLGIQLAVNVQMPSFCGGLGGKAIYIDTEGSFMGERAQEIAEACVEDISEYKRF 111

Query: 84  LRKDSPACRLDKQAKDFLDNIFYFRICT 1
           L KDS AC+ + Q KD L NI++FRIC+
Sbjct: 112 LHKDSQACQGEIQGKDVLQNIYFFRICS 139


>gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
          Length = 363

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/88 (67%), Positives = 71/88 (80%)
 Frame = -2

Query: 264 PGIGKTQLGIQLAVNAQIPADNGGLGGKAIYIDTEGSFMVERALQIAEACAQDMLEYYNL 85
           PGIGKTQ+GIQL+VN QIP + GGLGGKAIYIDTEGSFMVERALQIAEAC +DM EY   
Sbjct: 132 PGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGY 191

Query: 84  LRKDSPACRLDKQAKDFLDNIFYFRICT 1
           + K   A ++  + +D L+NIFYFR+C+
Sbjct: 192 MHKHFQANQVQMKPEDILENIFYFRVCS 219


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