BLASTX nr result

ID: Scutellaria23_contig00019924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019924
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1...   231   6e-59
ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]    231   6e-59
ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera] gi|...   228   9e-58
ref|XP_002314303.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56
ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]        222   4e-56

>ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cucumis sativus]
          Length = 801

 Score =  231 bits (590), Expect = 6e-59
 Identities = 113/131 (86%), Positives = 122/131 (93%)
 Frame = -1

Query: 622  GVYGTFLLACYDSDKEEFQSICKIGTGFSEAMLEERSASLRSKVIPKPKSYYRYSDSAFD 443
            GVYG FLLACYD+D EEFQSICKIGTGFSEAMLEERSASLRSKVIP+PKSYYRY D+  +
Sbjct: 660  GVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASLRSKVIPEPKSYYRYGDT-IN 718

Query: 442  PDVWFEPFEVWEVKAADLTISPVHRAAVGIVDANKGISLRFPRLLRVREDKTPEEASSSD 263
            PDVWFEP EVWEVKAADLTISPVHRA VGIVD++KGISLRFPRL+RVREDK PEEASSS+
Sbjct: 719  PDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVREDKNPEEASSSE 778

Query: 262  MVAEMYNAQKH 230
             VA+MYNAQKH
Sbjct: 779  QVADMYNAQKH 789


>ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]
          Length = 801

 Score =  231 bits (590), Expect = 6e-59
 Identities = 113/131 (86%), Positives = 122/131 (93%)
 Frame = -1

Query: 622  GVYGTFLLACYDSDKEEFQSICKIGTGFSEAMLEERSASLRSKVIPKPKSYYRYSDSAFD 443
            GVYG FLLACYD+D EEFQSICKIGTGFSEAMLEERSASLRSKVIP+PKSYYRY D+  +
Sbjct: 660  GVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASLRSKVIPEPKSYYRYGDT-IN 718

Query: 442  PDVWFEPFEVWEVKAADLTISPVHRAAVGIVDANKGISLRFPRLLRVREDKTPEEASSSD 263
            PDVWFEP EVWEVKAADLTISPVHRA VGIVD++KGISLRFPRL+RVREDK PEEASSS+
Sbjct: 719  PDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVREDKNPEEASSSE 778

Query: 262  MVAEMYNAQKH 230
             VA+MYNAQKH
Sbjct: 779  QVADMYNAQKH 789


>ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
           gi|297734904|emb|CBI17138.3| unnamed protein product
           [Vitis vinifera]
          Length = 723

 Score =  228 bits (580), Expect = 9e-58
 Identities = 111/130 (85%), Positives = 121/130 (93%)
 Frame = -1

Query: 622 GVYGTFLLACYDSDKEEFQSICKIGTGFSEAMLEERSASLRSKVIPKPKSYYRYSDSAFD 443
           GVYG FLLACYDS+KEE+QSICKIGTGFSEA+LEERSASLRSKVI +PK YYRY+DS  D
Sbjct: 582 GVYGAFLLACYDSNKEEYQSICKIGTGFSEAVLEERSASLRSKVISRPKPYYRYADS-ID 640

Query: 442 PDVWFEPFEVWEVKAADLTISPVHRAAVGIVDANKGISLRFPRLLRVREDKTPEEASSSD 263
           PDVWFEP EVWEVKAADLTISPVHRAAVGIVD NKGISLRFPRL+R+R+DK PE+ASSSD
Sbjct: 641 PDVWFEPTEVWEVKAADLTISPVHRAAVGIVDPNKGISLRFPRLVRIRDDKNPEQASSSD 700

Query: 262 MVAEMYNAQK 233
           +VAEMYN QK
Sbjct: 701 LVAEMYNGQK 710


>ref|XP_002314303.1| predicted protein [Populus trichocarpa] gi|222850711|gb|EEE88258.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score =  223 bits (567), Expect = 3e-56
 Identities = 109/131 (83%), Positives = 120/131 (91%)
 Frame = -1

Query: 622 GVYGTFLLACYDSDKEEFQSICKIGTGFSEAMLEERSASLRSKVIPKPKSYYRYSDSAFD 443
           GVYG FLLACY+S+ EEFQSICKIGTGFSE +LEERSASLRS+VIPKPKSYYR+ D+   
Sbjct: 542 GVYGAFLLACYNSNNEEFQSICKIGTGFSEQVLEERSASLRSQVIPKPKSYYRFGDT-IK 600

Query: 442 PDVWFEPFEVWEVKAADLTISPVHRAAVGIVDANKGISLRFPRLLRVREDKTPEEASSSD 263
           PDVWFEP EVWEVKAADLTISPVHRAA+G VD NKGISLRFPRL+RVREDK+PE+ASSS+
Sbjct: 601 PDVWFEPKEVWEVKAADLTISPVHRAAIGEVDPNKGISLRFPRLVRVREDKSPEQASSSE 660

Query: 262 MVAEMYNAQKH 230
            VAEMYNAQKH
Sbjct: 661 QVAEMYNAQKH 671


>ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
          Length = 776

 Score =  222 bits (566), Expect = 4e-56
 Identities = 109/131 (83%), Positives = 119/131 (90%)
 Frame = -1

Query: 622  GVYGTFLLACYDSDKEEFQSICKIGTGFSEAMLEERSASLRSKVIPKPKSYYRYSDSAFD 443
            GVYG FLLACYD+D EEFQSICKIGTGFSEA+LEERS+SLRSKVIPKPK+YYR+ ++  +
Sbjct: 634  GVYGAFLLACYDNDNEEFQSICKIGTGFSEAVLEERSSSLRSKVIPKPKAYYRFGET-IN 692

Query: 442  PDVWFEPFEVWEVKAADLTISPVHRAAVGIVDANKGISLRFPRLLRVREDKTPEEASSSD 263
            PDVWFE  EVWEVKAADLTISPVHRAAVGIVD NKGISLRFPRLLRVR DK PE+ASSS+
Sbjct: 693  PDVWFEASEVWEVKAADLTISPVHRAAVGIVDPNKGISLRFPRLLRVRPDKAPEQASSSE 752

Query: 262  MVAEMYNAQKH 230
             VAEMY AQKH
Sbjct: 753  QVAEMYKAQKH 763


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