BLASTX nr result

ID: Scutellaria23_contig00019800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019800
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   554   e-155
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   525   e-146
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   519   e-145
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   516   e-144
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...   514   e-143

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  554 bits (1427), Expect = e-155
 Identities = 267/362 (73%), Positives = 310/362 (85%), Gaps = 6/362 (1%)
 Frame = +3

Query: 3    YLENSIPFFYLYHSICDSRAMYVTYFPASSQIAVMVVSPFQSKELSTQMLERQFREASRA 182
            YLE SI FFYLYHSI + RA+YV YFPAS  I+V+VV+PFQ+KELS  ++E+QFREA  A
Sbjct: 1468 YLEQSISFFYLYHSISEGRAIYVGYFPASRTISVVVVNPFQNKELSPSIIEKQFREACEA 1527

Query: 183  SSSQPPMPNEGIMFKVDYVGSVKDAQGSLQRVINEYRNRHQGPVIAVIECPNIQLLKSGI 362
             S +PP P  GI FKVDYVG VKDA+  LQR IN++R++H GP +AVIECPN+ LLKSGI
Sbjct: 1528 LSIEPPQPRNGISFKVDYVGYVKDAEKFLQRTINDHRHQHHGPEVAVIECPNVHLLKSGI 1587

Query: 363  RALEDFPCVAIPSNARDSQYQAIGWQVIAAKIGIQRSAASLQWLNERVALSQYAHIPLGN 542
            RAL+D PCV IPSNARDS YQA+GWQ++AAKIG+QR AA+ QWLNER++L++YAH+PLGN
Sbjct: 1588 RALDDLPCVNIPSNARDSHYQALGWQIVAAKIGMQRCAAATQWLNERISLARYAHVPLGN 1647

Query: 543  FDVDWLIHIADIFLSRALRDQQQVLWISDNGFPDLGGTNEEVPCFIDEVNQPVLTYPGAY 722
            F+ DWLI  AD+F SRALRDQQQVLWISDNG PDLGG NEE  CF DEV+QPVLTYPGAY
Sbjct: 1648 FEPDWLIFTADLFFSRALRDQQQVLWISDNGIPDLGGLNEEDTCFADEVHQPVLTYPGAY 1707

Query: 723  RKVTVELKIHHLAVNALLKSNQLNEMEGGALFGLDQELNATSY------SFDEATSCAPA 884
            RKV+VELKIHHLAVNALLKSNQ+NEMEGGALFG +Q++N  ++       FDEAT CAP 
Sbjct: 1708 RKVSVELKIHHLAVNALLKSNQVNEMEGGALFGFEQDMNMGAHGFNEQCGFDEATLCAPT 1767

Query: 885  FRVLKQLIQRCLADAVTSGNVFADAVLQHLYRWLCSPKSKLHDPALHRMLHKVMQKGFAL 1064
            FRVLKQLIQRCLADAV+SGNVFADA+LQHLYRWL SP+SKLHDPALHR+LHKVMQK FAL
Sbjct: 1768 FRVLKQLIQRCLADAVSSGNVFADAILQHLYRWLYSPQSKLHDPALHRILHKVMQKVFAL 1827

Query: 1065 LM 1070
            L+
Sbjct: 1828 LL 1829


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  525 bits (1351), Expect = e-146
 Identities = 253/361 (70%), Positives = 301/361 (83%), Gaps = 5/361 (1%)
 Frame = +3

Query: 3    YLENSIPFFYLYHSICDSRAMYVTYFPASSQIAVMVVSPFQSKELSTQMLERQFREASRA 182
            YLE SI FFY+YHSI + RA+YV Y PA   ++V+VV+P+Q+K+++   LERQFREA +A
Sbjct: 1465 YLEQSISFFYIYHSISEGRAIYVIYLPALGTVSVVVVNPYQNKDITPSFLERQFREACQA 1524

Query: 183  SSSQPPMPNEGIMFKVDYVGSVKDAQGSLQRVINEYRNRHQGPVIAVIECPNIQLLKSGI 362
             S +   P   I+FKVDYVG VKDA+  LQ  I+E R++H GP +AVIECPN  L+KSG+
Sbjct: 1525 LSIEAIPPRNSIVFKVDYVGHVKDAEKILQGTISELRDKHHGPTLAVIECPNAHLMKSGV 1584

Query: 363  RALEDFPCVAIPSNARDSQYQAIGWQVIAAKIGIQRSAASLQWLNERVALSQYAHIPLGN 542
             AL+DFPCV+IPSNARDSQYQ +GWQ  +AKIG+QRSAAS QWLNER++LS+YAH+PLGN
Sbjct: 1585 PALDDFPCVSIPSNARDSQYQVLGWQQASAKIGMQRSAASSQWLNERISLSRYAHVPLGN 1644

Query: 543  FDVDWLIHIADIFLSRALRDQQQVLWISDNGFPDLGGTNEEVPCFIDEVNQPVLTYPGAY 722
            F++DWLI  AD+F SRAL DQQQVLWISD+G PDLGG +EE  CF DEV QPVLTYPGAY
Sbjct: 1645 FELDWLIFTADVFFSRALHDQQQVLWISDDGVPDLGGNHEESTCFADEVQQPVLTYPGAY 1704

Query: 723  RKVTVELKIHHLAVNALLKSNQLNEMEGGALFGLDQELNATS-----YSFDEATSCAPAF 887
            RKV+VELKIHHLAV+ALLKSNQ+NEMEGGAL G DQ++N+++       FDEATS A   
Sbjct: 1705 RKVSVELKIHHLAVDALLKSNQINEMEGGALLGFDQDMNSSTTLYDQSGFDEATSSASGL 1764

Query: 888  RVLKQLIQRCLADAVTSGNVFADAVLQHLYRWLCSPKSKLHDPALHRMLHKVMQKGFALL 1067
            RVLKQLIQRCLADAVTSGNVFADA+LQHLYRWLCSP+SKLHDPALHR+LHKVMQK FALL
Sbjct: 1765 RVLKQLIQRCLADAVTSGNVFADAILQHLYRWLCSPQSKLHDPALHRILHKVMQKVFALL 1824

Query: 1068 M 1070
            +
Sbjct: 1825 L 1825


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  519 bits (1337), Expect = e-145
 Identities = 254/361 (70%), Positives = 298/361 (82%), Gaps = 5/361 (1%)
 Frame = +3

Query: 3    YLENSIPFFYLYHSICDSRAMYVTYFPASSQIAVMVVSPFQSKELSTQMLERQFREASRA 182
            YLE SI FFYLY SI + RA+ V Y P    ++V+VV+P+Q+K+LS   LERQFREA  A
Sbjct: 1472 YLEQSISFFYLYQSISEGRAVVVVYLPFLRTVSVVVVNPYQNKDLSPSFLERQFREACIA 1531

Query: 183  SSSQPPMPNEGIMFKVDYVGSVKDAQGSLQRVINEYRNRHQGPVIAVIECPNIQLLKSGI 362
             S +PP P   I+FKVDYVG VKDA+  LQ  I E R++H GP +AVIECPN  L+KSGI
Sbjct: 1532 LSVEPPTPRNAIVFKVDYVGHVKDAERILQGTIREVRDKHHGPTLAVIECPNDHLMKSGI 1591

Query: 363  RALEDFPCVAIPSNARDSQYQAIGWQVIAAKIGIQRSAASLQWLNERVALSQYAHIPLGN 542
             AL++FPCV IPSNARDSQYQ +GWQ  AAK  +QRSAAS QWLNER+ LS+YAH+PLGN
Sbjct: 1592 PALDNFPCVRIPSNARDSQYQVLGWQQAAAKTAMQRSAASSQWLNERITLSRYAHVPLGN 1651

Query: 543  FDVDWLIHIADIFLSRALRDQQQVLWISDNGFPDLGGTNEEVPCFIDEVNQPVLTYPGAY 722
            F++DWLI  AD+F+SRALRDQQQ+LWISD+G PDLGG +EE  CF DEV+QP+LTYPGAY
Sbjct: 1652 FELDWLIFTADVFISRALRDQQQLLWISDDGVPDLGGISEESSCFADEVHQPILTYPGAY 1711

Query: 723  RKVTVELKIHHLAVNALLKSNQLNEMEGGALFGLDQELNATS-----YSFDEATSCAPAF 887
            RKV+VELKIHHLAVNALLKS+Q+NEMEGGAL G DQ++++ S     Y  DEATS APA 
Sbjct: 1712 RKVSVELKIHHLAVNALLKSSQVNEMEGGALLGFDQDMSSGSHICEQYGVDEATSSAPAL 1771

Query: 888  RVLKQLIQRCLADAVTSGNVFADAVLQHLYRWLCSPKSKLHDPALHRMLHKVMQKGFALL 1067
            RVLKQLIQRCLADAVTSG+VFADA+LQHLYRWLCSP+SKLHDPALHR+LHKVMQK FALL
Sbjct: 1772 RVLKQLIQRCLADAVTSGSVFADALLQHLYRWLCSPQSKLHDPALHRVLHKVMQKVFALL 1831

Query: 1068 M 1070
            +
Sbjct: 1832 L 1832


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  516 bits (1329), Expect = e-144
 Identities = 245/362 (67%), Positives = 301/362 (83%), Gaps = 6/362 (1%)
 Frame = +3

Query: 3    YLENSIPFFYLYHSICDSRAMYVTYFPASSQIAVMVVSPFQSKELSTQMLERQFREASRA 182
            YLE SI FFY+YHSI + RA++VT+FP++  I V+VV+P+Q+K+LS+  LERQFREAS+ 
Sbjct: 1463 YLEKSISFFYVYHSISEGRAIFVTFFPSTRSIFVVVVNPYQNKDLSSTFLERQFREASQM 1522

Query: 183  SSSQPPMPNEGIMFKVDYVGSVKDAQGSLQRVINEYRNRHQGPVIAVIECPNIQLLKSGI 362
             S +   P  GI +KVDYV ++K+A+  LQR I E+R+ + GP +AVI+CP++Q LKSG+
Sbjct: 1523 LSGESQPPKSGITYKVDYVVNIKEAEVILQRSITEHRSLNHGPALAVIQCPSVQRLKSGV 1582

Query: 363  RALEDFPCVAIPSNARDSQYQAIGWQVIAAKIGIQRSAASLQWLNERVALSQYAHIPLGN 542
            R L+DFPCV IPSNARD+QYQ +GWQ  AAKIG+QR AAS QWLNER++L++YAH+PLGN
Sbjct: 1583 RVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGN 1642

Query: 543  FDVDWLIHIADIFLSRALRDQQQVLWISDNGFPDLGGTNEEVPCFIDEVNQPVLTYPGAY 722
            F++DWLI  ADIF SRAL DQQQVLWISD+G PD+GG N E  CF DEV QP+LTYPGAY
Sbjct: 1643 FELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAY 1702

Query: 723  RKVTVELKIHHLAVNALLKSNQLNEMEGGALFGLDQELNATSY------SFDEATSCAPA 884
            RKV+VELKIHHLAVNALLKSNQ+NEMEGG+LFG ++++   +        FDEA SCAPA
Sbjct: 1703 RKVSVELKIHHLAVNALLKSNQVNEMEGGSLFGFERDIQCGAQFSNEEGGFDEAASCAPA 1762

Query: 885  FRVLKQLIQRCLADAVTSGNVFADAVLQHLYRWLCSPKSKLHDPALHRMLHKVMQKGFAL 1064
            FRVLKQLIQRCL DAVTSGNV+ADA+LQHLYRW+CSP+SKLHDPALHR+ HKVMQK FAL
Sbjct: 1763 FRVLKQLIQRCLTDAVTSGNVYADAILQHLYRWICSPQSKLHDPALHRLFHKVMQKVFAL 1822

Query: 1065 LM 1070
            L+
Sbjct: 1823 LL 1824


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
            sativus]
          Length = 2206

 Score =  514 bits (1325), Expect = e-143
 Identities = 244/362 (67%), Positives = 300/362 (82%), Gaps = 6/362 (1%)
 Frame = +3

Query: 3    YLENSIPFFYLYHSICDSRAMYVTYFPASSQIAVMVVSPFQSKELSTQMLERQFREASRA 182
            YLE SI FFY+YHSI + RA++VT+FP++  I V+VV+P+Q+K+LS+  LERQFREAS+ 
Sbjct: 1463 YLEKSISFFYVYHSISEGRAIFVTFFPSTRSIFVVVVNPYQNKDLSSTFLERQFREASQM 1522

Query: 183  SSSQPPMPNEGIMFKVDYVGSVKDAQGSLQRVINEYRNRHQGPVIAVIECPNIQLLKSGI 362
             S +   P  GI +KVDYV ++K+A+  LQR I E+R+ + GP +AVI+CP++Q LKSG+
Sbjct: 1523 LSGESQPPKSGITYKVDYVVNIKEAEVILQRSITEHRSLNHGPTLAVIQCPSVQRLKSGV 1582

Query: 363  RALEDFPCVAIPSNARDSQYQAIGWQVIAAKIGIQRSAASLQWLNERVALSQYAHIPLGN 542
            R L+DFPCV IPSNARD+QYQ +GWQ  AAKIG+QR AAS QWLNER++L++YAH+PLGN
Sbjct: 1583 RVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGN 1642

Query: 543  FDVDWLIHIADIFLSRALRDQQQVLWISDNGFPDLGGTNEEVPCFIDEVNQPVLTYPGAY 722
            F++DWLI  ADIF SRAL DQQQVLWISD+G PD+GG N E  CF DEV QP+LTYPGAY
Sbjct: 1643 FELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAY 1702

Query: 723  RKVTVELKIHHLAVNALLKSNQLNEMEGGALFGLDQELNATSY------SFDEATSCAPA 884
            RKV+VE KIHHLAVNALLKSNQ+NEMEGG+LFG ++++   +        FDEA SCAPA
Sbjct: 1703 RKVSVEFKIHHLAVNALLKSNQVNEMEGGSLFGFERDIQCGAQFSNEEGGFDEAASCAPA 1762

Query: 885  FRVLKQLIQRCLADAVTSGNVFADAVLQHLYRWLCSPKSKLHDPALHRMLHKVMQKGFAL 1064
            FRVLKQLIQRCL DAVTSGNV+ADA+LQHLYRW+CSP+SKLHDPALHR+ HKVMQK FAL
Sbjct: 1763 FRVLKQLIQRCLTDAVTSGNVYADAILQHLYRWICSPQSKLHDPALHRLFHKVMQKVFAL 1822

Query: 1065 LM 1070
            L+
Sbjct: 1823 LL 1824


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