BLASTX nr result

ID: Scutellaria23_contig00019726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019726
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1,...   155   2e-36
ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like...   154   7e-36
emb|CBI25868.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like...   147   1e-33

>ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|222834003|gb|EEE72480.1|
           predicted protein [Populus trichocarpa]
          Length = 982

 Score =  162 bits (410), Expect = 3e-38
 Identities = 85/143 (59%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
 Frame = -2

Query: 420 MVKFHEHIIGDLLEDPXXXXXXXXXXXXLPKLISSLLNLHDPSHGALLILNASPSQKSSI 241
           MV+FHEHII DLLEDP            LPKL+SSLL+LH PS G LLI +  P+ KS I
Sbjct: 1   MVQFHEHIITDLLEDPAGGLVILSSGLSLPKLVSSLLSLHSPSQGTLLIFSPPPTLKSLI 60

Query: 240 ----DTDSQFSSITSDLSAHHRLSLYASGEICFITARILIVDLLTQRLPTTSIAGIILLN 73
               +T+     IT+DL +HHRLSLY+SG+ICFIT RILIVDLL+ ++PT+S+AG+I+LN
Sbjct: 61  LHHHNTNPNPIEITADLPSHHRLSLYSSGQICFITPRILIVDLLSNKIPTSSLAGLIILN 120

Query: 72  AHSLSDTSTEAFIVRILRSTNRS 4
           AHS+S+TSTEAFIVRIL+S+ ++
Sbjct: 121 AHSISETSTEAFIVRILKSSTQN 143


>ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
           communis] gi|223529184|gb|EEF31160.1| DNA repair
           endonuclease xp-f / mei-9 / rad1, putative [Ricinus
           communis]
          Length = 887

 Score =  155 bits (393), Expect = 2e-36
 Identities = 87/146 (59%), Positives = 107/146 (73%), Gaps = 6/146 (4%)
 Frame = -2

Query: 420 MVKFHEHIIGDLLEDPXXXXXXXXXXXXLPKLISSLLNLHDPSHGALLILNAS--PSQKS 247
           MV+FHEHII DLLEDP            LPKLISSLL LH  S G LLIL++S  P  K+
Sbjct: 1   MVQFHEHIITDLLEDPSGGLVILSSGLCLPKLISSLLLLHHSSQGTLLILSSSSSPYLKT 60

Query: 246 SI----DTDSQFSSITSDLSAHHRLSLYASGEICFITARILIVDLLTQRLPTTSIAGIIL 79
            I    +     + IT+DL AHHRLSLY SGEICFIT RILIVDLLT ++P ++++GII+
Sbjct: 61  LILHHHNNHHNITEITADLPAHHRLSLYTSGEICFITPRILIVDLLTNKIPVSALSGIII 120

Query: 78  LNAHSLSDTSTEAFIVRILRSTNRSL 1
           LNAHSLS+TSTEAFIVRIL++ ++S+
Sbjct: 121 LNAHSLSETSTEAFIVRILKTLSQSI 146


>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
          Length = 964

 Score =  154 bits (389), Expect = 7e-36
 Identities = 87/146 (59%), Positives = 103/146 (70%), Gaps = 9/146 (6%)
 Frame = -2

Query: 420 MVKFHEHIIGDLLEDPXXXXXXXXXXXXLPKLISSLLNLHDPSHGALLILNASPSQKSSI 241
           MV+FHEHII +LLED             LPKLISSLL LH PS G+LL+L++SPSQK  I
Sbjct: 1   MVQFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLI 60

Query: 240 ---------DTDSQFSSITSDLSAHHRLSLYASGEICFITARILIVDLLTQRLPTTSIAG 88
                       +  S IT+DL AHHR SLY SG + FIT+RILIVDLLT R+PT+ IAG
Sbjct: 61  LYHLDANPNPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSGIAG 120

Query: 87  IILLNAHSLSDTSTEAFIVRILRSTN 10
           +I+LNAHSLS+T TEAFIVRI+RS N
Sbjct: 121 LIILNAHSLSETCTEAFIVRIIRSLN 146


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  150 bits (380), Expect = 8e-35
 Identities = 85/145 (58%), Positives = 101/145 (69%), Gaps = 9/145 (6%)
 Frame = -2

Query: 417 VKFHEHIIGDLLEDPXXXXXXXXXXXXLPKLISSLLNLHDPSHGALLILNASPSQKSSI- 241
           + FHEHII +LLED             LPKLISSLL LH PS G+LL+L++SPSQK  I 
Sbjct: 236 LNFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLIL 295

Query: 240 --------DTDSQFSSITSDLSAHHRLSLYASGEICFITARILIVDLLTQRLPTTSIAGI 85
                      +  S IT+DL AHHR SLY SG + FIT+RILIVDLLT R+PT+ IAG+
Sbjct: 296 YHLDANPNPNPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSGIAGL 355

Query: 84  ILLNAHSLSDTSTEAFIVRILRSTN 10
           I+LNAHSLS+T TEAFIVRI+RS N
Sbjct: 356 IILNAHSLSETCTEAFIVRIIRSLN 380


>ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus]
           gi|449505229|ref|XP_004162411.1| PREDICTED: DNA repair
           endonuclease UVH1-like [Cucumis sativus]
          Length = 1003

 Score =  147 bits (370), Expect = 1e-33
 Identities = 85/154 (55%), Positives = 103/154 (66%), Gaps = 15/154 (9%)
 Frame = -2

Query: 420 MVKFHEHIIGDLLEDPXXXXXXXXXXXXLPKLISSLLNLHDPSHGALLILNASPSQKSSI 241
           MV+FHEHII +LLED             L KL+SSLL LH PS G LL++  SPS  S +
Sbjct: 1   MVQFHEHIITELLEDSNGGLVIISSGLNLAKLVSSLLFLHSPSQGTLLLV--SPSSHSQL 58

Query: 240 DTDSQF---------------SSITSDLSAHHRLSLYASGEICFITARILIVDLLTQRLP 106
              SQ                S I++DL AHHRLSLY+SG   F+T RILIVDLLT +LP
Sbjct: 59  SLKSQILFYLNRHQSDPLTFPSEISADLPAHHRLSLYSSGSSFFVTPRILIVDLLTHKLP 118

Query: 105 TTSIAGIILLNAHSLSDTSTEAFIVRILRSTNRS 4
           T++IAG+I+LNAHSLS+TSTEAFIVRI+RS NR+
Sbjct: 119 TSNIAGLIILNAHSLSETSTEAFIVRIIRSHNRN 152


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