BLASTX nr result

ID: Scutellaria23_contig00019480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019480
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...    84   9e-15
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...    84   1e-14
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...    79   5e-13
gb|AAF18240.1|AC011438_2 T23G18.11 [Arabidopsis thaliana]              77   1e-12

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/106 (39%), Positives = 63/106 (59%)
 Frame = +1

Query: 1    PDWLHKKVREKEDKFRQRKLVDIFSRKQRDAAAKVSGIPEANDQATVVHNVTDMEDFRNT 180
            PDWL+KKVREKE+KFRQRKLVD+F   +RD   K++     ++      N+ D+EDFRN 
Sbjct: 1133 PDWLYKKVREKEEKFRQRKLVDMFGSLKRDDNVKMNVDAITSNHVISEENIEDLEDFRNK 1192

Query: 181  RKTPPVRPQPIVHSFGINNKQNGVEARNLFESLEQNDRDGSGHNQS 318
             +T    P+PIV  + +N KQ      +    L  + ++ + H++S
Sbjct: 1193 GRTSSAGPRPIVRCYEVNGKQQS----DAMNCLANSPQEPANHSES 1234


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
 Frame = +1

Query: 1    PDWLHKKVREKEDKFRQRKLVDIFSRKQRDAAAKVSGIPEANDQATVVH----NVTDMED 168
            PDWLH+KVREKEDKFRQRKLVDIF+ + RD       +    D AT+ +    NV D+ED
Sbjct: 1134 PDWLHRKVREKEDKFRQRKLVDIFNLRSRD------DLSRKMDDATITNHDEANVKDLED 1187

Query: 169  FRNTRKTPPVRPQPIVHSFGINNKQNGVEARNLFESLEQNDRDGSGHNQSTHPLH 333
            F+  + +   RP+PIV  + +N K++  +   L  + +Q D   S H  S+ P H
Sbjct: 1188 FQ-IKSSSINRPRPIVRCYDVNEKRSAKKTGQLNSAEQQTD---SVHELSSQPQH 1238


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/116 (39%), Positives = 67/116 (57%)
 Frame = +1

Query: 1    PDWLHKKVREKEDKFRQRKLVDIFSRKQRDAAAKVSGIPEANDQATVVHNVTDMEDFRNT 180
            PDWLHKKVREKEDKFRQRKLVDIF    ++   + +     ++      NV D+EDFRN 
Sbjct: 1135 PDWLHKKVREKEDKFRQRKLVDIFRLSSKEDFVRKNNDTITDNCMMDEENVEDLEDFRN- 1193

Query: 181  RKTPPVRPQPIVHSFGINNKQNGVEARNLFESLEQNDRDGSGHNQSTHPLHKVHEE 348
            +      P+PIVH +  N++++ V+A    +S  Q   +G    +S H L  + ++
Sbjct: 1194 KSISTNGPRPIVHCYATNSEEHSVKATGRMDSSHQQTDNG----ESVHELSSLVQQ 1245


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/105 (41%), Positives = 58/105 (55%)
 Frame = +1

Query: 1    PDWLHKKVREKEDKFRQRKLVDIFSRKQRDAAAKVSGIPEANDQATVVHNVTDMEDFRNT 180
            PDWLHKKVREKEDKFRQRK+ D F    ++  +K        +   V   V DMEDF N 
Sbjct: 1147 PDWLHKKVREKEDKFRQRKIDDTFKSMNKNEHSKKHNDSSGVNLVMVDDTVNDMEDFGNK 1206

Query: 181  RKTPPVRPQPIVHSFGINNKQNGVEARNLFESLEQNDRDGSGHNQ 315
             ++  + P+PI+  +  NN+Q+  E  N  E  EQ   D S  +Q
Sbjct: 1207 GRSSTLGPRPIIRHYEANNEQHS-EKFNGQEDSEQQHIDSSNIDQ 1250


>gb|AAF18240.1|AC011438_2 T23G18.11 [Arabidopsis thaliana]
          Length = 2271

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/92 (43%), Positives = 55/92 (59%)
 Frame = +1

Query: 1    PDWLHKKVREKEDKFRQRKLVDIFSRKQRDAAAKVSGIPEANDQATVVHNVTDMEDFRNT 180
            PDWLHKKVREK+DKFRQRKLVD+FS   +D     + +P   D      NV D+EDF   
Sbjct: 1154 PDWLHKKVREKDDKFRQRKLVDMFSSANKDVVLD-TDLPVTKD------NVEDIEDFCKE 1206

Query: 181  RKTPPVRPQPIVHSFGINNKQNGVEARNLFES 276
             +     P+PI  S+ +N KQ+  E +  +++
Sbjct: 1207 NRPSVKGPKPIARSYEVNKKQSECEQQESWDT 1238


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