BLASTX nr result

ID: Scutellaria23_contig00019368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019368
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   321   8e-86
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   310   1e-82
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   306   3e-81
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              303   2e-80
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   303   2e-80

>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  321 bits (823), Expect = 8e-86
 Identities = 162/188 (86%), Positives = 178/188 (94%)
 Frame = -1

Query: 565 VANSRIIRPISKGVVHRICAGQVILDLSSAVKELVENSLDAGATSVEIALKDYGLESFQV 386
           ++NS II+PI+KGVVHRICAGQVILDLSSAVKELVENSLDAGATS+EI+LKDYG +SFQV
Sbjct: 3   ISNSPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQV 62

Query: 385 IDNGSGISPQNFKVLALKHHTSKLLDFPDLQSLTTYGFRGEALSSLCALGELTVETRTID 206
           IDNG G+SP NFKVLALKHHTSKL DFPDLQSLTT+GFRGEALSSLCALGELTVETRT +
Sbjct: 63  IDNGCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKN 122

Query: 205 DVVATHLTFDRMGLLTAERKTARQVGTTVTVKNLFSNLPVRSKEFRRNIRKEYGKLISLL 26
           + VATHL++DR GLLTAE+KTARQ+GTTVTVK LFSNLPVRSKEF RNIRKEYGKLISLL
Sbjct: 123 ESVATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLL 182

Query: 25  NAYAVIAK 2
           NAYA+IAK
Sbjct: 183 NAYALIAK 190


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
           gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
           repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  310 bits (795), Expect = 1e-82
 Identities = 162/193 (83%), Positives = 176/193 (91%), Gaps = 1/193 (0%)
 Frame = -1

Query: 577 MEGGVA-NSRIIRPISKGVVHRICAGQVILDLSSAVKELVENSLDAGATSVEIALKDYGL 401
           ME G+A +S  I+PI+KG+VHRICAGQVILDLSSAVKELVENSLDAGATS+EI+LKDYG 
Sbjct: 1   MEVGLAVDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGE 60

Query: 400 ESFQVIDNGSGISPQNFKVLALKHHTSKLLDFPDLQSLTTYGFRGEALSSLCALGELTVE 221
           E FQVIDNGSGISP NF+VLALKHHTSKL DFPDLQSLTTYGFRGEALSSLC+LG LTVE
Sbjct: 61  EWFQVIDNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVE 120

Query: 220 TRTIDDVVATHLTFDRMGLLTAERKTARQVGTTVTVKNLFSNLPVRSKEFRRNIRKEYGK 41
           T+T ++ VATHLTFD  GLL AE+KTARQVGTTV VK LFSNLPVRSKEF RNIRKEYGK
Sbjct: 121 TKTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGK 180

Query: 40  LISLLNAYAVIAK 2
           LISLLNAYAVIA+
Sbjct: 181 LISLLNAYAVIAR 193


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  306 bits (784), Expect = 3e-81
 Identities = 157/182 (86%), Positives = 169/182 (92%)
 Frame = -1

Query: 547 IRPISKGVVHRICAGQVILDLSSAVKELVENSLDAGATSVEIALKDYGLESFQVIDNGSG 368
           IRPI+K  VHRICAGQVILDLSSAVKELVENSLDAGATS+EI+LKDYGLESFQVIDNG G
Sbjct: 8   IRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQVIDNGCG 67

Query: 367 ISPQNFKVLALKHHTSKLLDFPDLQSLTTYGFRGEALSSLCALGELTVETRTIDDVVATH 188
           +SP NFKVLALKHHTSKL DF DLQSLTT+GFRGEALSSLC LG+LTVETRT ++ VATH
Sbjct: 68  VSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTKNEPVATH 127

Query: 187 LTFDRMGLLTAERKTARQVGTTVTVKNLFSNLPVRSKEFRRNIRKEYGKLISLLNAYAVI 8
           LTF+  GLLTAERKTARQVGTTVTVK LFS+LPVRSKEF RNIRKEYGKLISLLNAYA+I
Sbjct: 128 LTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISLLNAYALI 187

Query: 7   AK 2
           +K
Sbjct: 188 SK 189


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  303 bits (776), Expect = 2e-80
 Identities = 158/192 (82%), Positives = 171/192 (89%), Gaps = 1/192 (0%)
 Frame = -1

Query: 577 MEGGV-ANSRIIRPISKGVVHRICAGQVILDLSSAVKELVENSLDAGATSVEIALKDYGL 401
           MEG   + S  IR I+KG VHRIC+GQVILDLSSAVKELVENSLDAGATS+EIALK+YG 
Sbjct: 1   MEGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQ 60

Query: 400 ESFQVIDNGSGISPQNFKVLALKHHTSKLLDFPDLQSLTTYGFRGEALSSLCALGELTVE 221
           E FQVIDNG GISP NFKVLALKHHTSKL+DFPDLQSLTT+GFRGEALSSLCALG LTVE
Sbjct: 61  EWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVE 120

Query: 220 TRTIDDVVATHLTFDRMGLLTAERKTARQVGTTVTVKNLFSNLPVRSKEFRRNIRKEYGK 41
           TRT ++ VATHLTFD  GLL  E+KTARQ+GTTVTVK LFSNLPVRSKEF RNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGK 180

Query: 40  LISLLNAYAVIA 5
           LISLL+AYA+IA
Sbjct: 181 LISLLSAYALIA 192


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  303 bits (776), Expect = 2e-80
 Identities = 158/192 (82%), Positives = 171/192 (89%), Gaps = 1/192 (0%)
 Frame = -1

Query: 577 MEGGV-ANSRIIRPISKGVVHRICAGQVILDLSSAVKELVENSLDAGATSVEIALKDYGL 401
           MEG   + S  IR I+KG VHRIC+GQVILDLSSAVKELVENSLDAGATS+EIALK+YG 
Sbjct: 1   MEGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQ 60

Query: 400 ESFQVIDNGSGISPQNFKVLALKHHTSKLLDFPDLQSLTTYGFRGEALSSLCALGELTVE 221
           E FQVIDNG GISP NFKVLALKHHTSKL+DFPDLQSLTT+GFRGEALSSLCALG LTVE
Sbjct: 61  EWFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVE 120

Query: 220 TRTIDDVVATHLTFDRMGLLTAERKTARQVGTTVTVKNLFSNLPVRSKEFRRNIRKEYGK 41
           TRT ++ VATHLTFD  GLL  E+KTARQ+GTTVTVK LFSNLPVRSKEF RNIRKEYGK
Sbjct: 121 TRTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGK 180

Query: 40  LISLLNAYAVIA 5
           LISLL+AYA+IA
Sbjct: 181 LISLLSAYALIA 192


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