BLASTX nr result

ID: Scutellaria23_contig00019353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019353
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519367.1| replication factor C / DNA polymerase III ga...   149   3e-34
ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
emb|CAN80768.1| hypothetical protein VITISV_013865 [Vitis vinifera]   137   1e-30
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242...   136   2e-30
emb|CBI29623.3| unnamed protein product [Vitis vinifera]              136   2e-30

>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223541434|gb|EEF42984.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1270

 Score =  149 bits (375), Expect = 3e-34
 Identities = 90/165 (54%), Positives = 114/165 (69%), Gaps = 7/165 (4%)
 Frame = +2

Query: 5   DSLSDARNVGGNDSRSDTYLSEKYPSA-IFRCKDTDF-TPSIMRT--IKKKSKRSNYSSA 172
           DSLSDARN    DS+SDTYL +   S+ IFRC+D +  +PS+ R   IKKKSK+++    
Sbjct: 122 DSLSDARNAA--DSKSDTYLGDSRSSSMIFRCRDANLVSPSMRRAMGIKKKSKKTDTHLD 179

Query: 173 SLRHHNEKLQKQIVLSRCAKN---VVEGLGREDLVSLVDQSDDTEDYCNSEDLRRATALS 343
            L  +    QK+I L R  K+   +  GLGRED V   +QSDDTEDY NSEDLR+ +  S
Sbjct: 180 ILSRYQ---QKEINLRRLLKSHPSIALGLGREDSV---EQSDDTEDYSNSEDLRKISGAS 233

Query: 344 PLLARLRHKGWAPSPTKLLRSRRKEDDSVSYSTPALSTSSHNKYC 478
           PLL +L+HK W+ SP+KLLR  RKED S +YSTPALSTSS+N+YC
Sbjct: 234 PLLIKLKHKRWSHSPSKLLRISRKEDSSYTYSTPALSTSSYNRYC 278


>ref|XP_002303217.1| predicted protein [Populus trichocarpa] gi|222840649|gb|EEE78196.1|
           predicted protein [Populus trichocarpa]
          Length = 1241

 Score =  139 bits (350), Expect = 2e-31
 Identities = 82/163 (50%), Positives = 112/163 (68%), Gaps = 6/163 (3%)
 Frame = +2

Query: 5   DSLSDARNVGGNDSRSDTYLSE-KYPSAIFRCKDTDF-TPSIMRT--IKKKSKRSNYSSA 172
           DSLSDARNVG  DS+SDTYL E + P+ IFR +D +  +PS+ R   +KKK K++N    
Sbjct: 133 DSLSDARNVG--DSKSDTYLGETRSPAMIFRRRDANLVSPSMRRAMGVKKKGKKTNTRLD 190

Query: 173 SLRHHNEKLQ--KQIVLSRCAKNVVEGLGREDLVSLVDQSDDTEDYCNSEDLRRATALSP 346
            L  + EK    ++++    +  +  GLGR+   ++V+QSDDTE+Y NSEDLR+ +  SP
Sbjct: 191 VLSRYQEKEMNLRRLLKGHPSMGLSLGLGRD---AIVEQSDDTEEYSNSEDLRKISGASP 247

Query: 347 LLARLRHKGWAPSPTKLLRSRRKEDDSVSYSTPALSTSSHNKY 475
           LL +L+HK W+ SP+K LR+ RKED S  +STPALSTSS NKY
Sbjct: 248 LLLKLKHKNWSHSPSKFLRTSRKEDSSYCHSTPALSTSSCNKY 290


>emb|CAN80768.1| hypothetical protein VITISV_013865 [Vitis vinifera]
          Length = 785

 Score =  137 bits (344), Expect = 1e-30
 Identities = 84/169 (49%), Positives = 114/169 (67%), Gaps = 12/169 (7%)
 Frame = +2

Query: 5   DSLSDARNVGGNDSRSDTYLSEK-----YPSAIFRCKDTDFT----PSIMRTIKKKSKRS 157
           DSLSD RN  G DS+SDTY+  +     + S IFRC+D +      PS ++  KKK  ++
Sbjct: 105 DSLSDWRN--GVDSKSDTYIGGRRHRRHHASMIFRCRDANLVAMGRPSGIK--KKKGSKN 160

Query: 158 NYSSASLRHHNEKLQKQIVLSRC--AKNVVEG-LGREDLVSLVDQSDDTEDYCNSEDLRR 328
            +S A LRH  ++ Q+Q+  +R   +K ++EG LGR+D V   +QSDDTE+Y NSED RR
Sbjct: 161 VHSIALLRHQQQQQQQQLNTARSGNSKRLLEGILGRDDSV---EQSDDTEEYYNSEDFRR 217

Query: 329 ATALSPLLARLRHKGWAPSPTKLLRSRRKEDDSVSYSTPALSTSSHNKY 475
               SPLL+RLR + W+ S ++LLRS+RK+D S SYSTPALSTSS+N Y
Sbjct: 218 ICEASPLLSRLRQRNWSRSSSRLLRSKRKDDSSYSYSTPALSTSSYNPY 266


>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
          Length = 1274

 Score =  136 bits (342), Expect = 2e-30
 Identities = 83/167 (49%), Positives = 110/167 (65%), Gaps = 10/167 (5%)
 Frame = +2

Query: 5   DSLSDARNVGGNDSRSDTYLSEK-----YPSAIFRCKDTDFT----PSIMRTIKKKSKRS 157
           DSLSD RN  G DS+SDTY+  +     + S IFRC+D +      PS ++  KKK  ++
Sbjct: 105 DSLSDWRN--GVDSKSDTYIGGRRHRRHHASMIFRCRDANLVAMGRPSGIK--KKKGSKN 160

Query: 158 NYSSASLRHHNEKLQKQIVLSRCAKNVVEG-LGREDLVSLVDQSDDTEDYCNSEDLRRAT 334
            +S A LRH  ++ Q     S  +K ++EG LGR+D V   +QSDDTE+Y NSED RR  
Sbjct: 161 VHSIALLRHQQQQQQLNTARSGNSKRLLEGILGRDDSV---EQSDDTEEYYNSEDFRRIC 217

Query: 335 ALSPLLARLRHKGWAPSPTKLLRSRRKEDDSVSYSTPALSTSSHNKY 475
             SPLL+RLR + W+ S ++LLRS+RK+D S SYSTPALSTSS+N Y
Sbjct: 218 EASPLLSRLRQRNWSRSSSRLLRSKRKDDSSYSYSTPALSTSSYNPY 264


>emb|CBI29623.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  136 bits (342), Expect = 2e-30
 Identities = 83/167 (49%), Positives = 110/167 (65%), Gaps = 10/167 (5%)
 Frame = +2

Query: 5   DSLSDARNVGGNDSRSDTYLSEK-----YPSAIFRCKDTDFT----PSIMRTIKKKSKRS 157
           DSLSD RN  G DS+SDTY+  +     + S IFRC+D +      PS ++  KKK  ++
Sbjct: 64  DSLSDWRN--GVDSKSDTYIGGRRHRRHHASMIFRCRDANLVAMGRPSGIK--KKKGSKN 119

Query: 158 NYSSASLRHHNEKLQKQIVLSRCAKNVVEG-LGREDLVSLVDQSDDTEDYCNSEDLRRAT 334
            +S A LRH  ++ Q     S  +K ++EG LGR+D V   +QSDDTE+Y NSED RR  
Sbjct: 120 VHSIALLRHQQQQQQLNTARSGNSKRLLEGILGRDDSV---EQSDDTEEYYNSEDFRRIC 176

Query: 335 ALSPLLARLRHKGWAPSPTKLLRSRRKEDDSVSYSTPALSTSSHNKY 475
             SPLL+RLR + W+ S ++LLRS+RK+D S SYSTPALSTSS+N Y
Sbjct: 177 EASPLLSRLRQRNWSRSSSRLLRSKRKDDSSYSYSTPALSTSSYNPY 223


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