BLASTX nr result

ID: Scutellaria23_contig00019177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019177
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634307.1| PREDICTED: uncharacterized protein LOC100853...   106   1e-20
ref|XP_002284718.1| PREDICTED: uncharacterized protein LOC100250...    92   2e-16
ref|XP_001374007.2| PREDICTED: zinc finger RNA-binding protein 2...    67   8e-09
ref|XP_002298509.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_003381809.1| zinc finger protein [Trichinella spiralis] g...    64   9e-08

>ref|XP_003634307.1| PREDICTED: uncharacterized protein LOC100853199 [Vitis vinifera]
           gi|297733926|emb|CBI15173.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score =  106 bits (265), Expect = 1e-20
 Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
 Frame = +2

Query: 575 EDLRCEVCEISCSSKATLQQHLMGRPHKAKLLYKRGCN---GDAKGKPRCDVCQIWCSDR 745
           +DL C+VC+++C S   L+QHL+G+ HK  L  K G N    DA  +  CD+C+IWC ++
Sbjct: 92  DDLFCKVCQVACPSSFHLKQHLIGQKHKDTLDLKSGRNIREEDANTRKWCDLCKIWCINK 151

Query: 746 DGLNMHFKGQKHK---AKLQLCHNNGGHRVSKSPIMCQLCHVPCMNEDLFNMHLKGKQHI 916
             L  HFKG+KH+    +L+L    G  + ++  + C+LC + CM+E  FN HLKGK+HI
Sbjct: 152 YSLEQHFKGKKHQDNVQELELGGKEGQRKTNQVKLYCELCKLWCMDEYAFNQHLKGKKHI 211


>ref|XP_002284718.1| PREDICTED: uncharacterized protein LOC100250232 [Vitis vinifera]
          Length = 223

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 18/154 (11%)
 Frame = +2

Query: 509 SELKRKARRC--NQQPQ---------SSMKKAAEDLRCEVCEISCSSKATLQQHLMGRPH 655
           S +KRKA     N QP+         +++K   +DL C+VC++ CS   +L+QHL+G+ H
Sbjct: 56  SGIKRKAPTSSFNCQPRQMLQPVDHSNTLKTQRDDLFCKVCQVPCSGANSLKQHLLGQKH 115

Query: 656 KAKLLYKRGCNG----DAKGKPRCDVCQIWCSDRDGLNMHFKGQKHKAKLQ---LCHNNG 814
           K +L       G     AK +  C++C+IWC +++    H KG+KH+++ Q   L   +G
Sbjct: 116 KDRLQNLTPSMGIGEEGAKQRLWCELCKIWCMNKNSFKDHLKGKKHQSRAQAVELHGTDG 175

Query: 815 GHRVSKSPIMCQLCHVPCMNEDLFNMHLKGKQHI 916
           G   ++    C++C + CM  D FN HL+ K+HI
Sbjct: 176 GEIANQMNKYCKVCKIWCM--DAFNQHLESKRHI 207



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
 Frame = +2

Query: 713 CDVCQIWCSDRDGLNMHFKGQKHKAKLQ-LCHNNG-GHRVSKSPIMCQLCHVPCMNEDLF 886
           C VCQ+ CS  + L  H  GQKHK +LQ L  + G G   +K  + C+LC + CMN++ F
Sbjct: 93  CKVCQVPCSGANSLKQHLLGQKHKDRLQNLTPSMGIGEEGAKQRLWCELCKIWCMNKNSF 152

Query: 887 NMHLKGKQHITKVE 928
             HLKGK+H ++ +
Sbjct: 153 KDHLKGKKHQSRAQ 166


>ref|XP_001374007.2| PREDICTED: zinc finger RNA-binding protein 2 [Monodelphis
           domestica]
          Length = 1114

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 27/231 (11%)
 Frame = +2

Query: 233 YKKTANNEPTKMLTRSTNWSNKGSISIKKEAWPSSNEATNPRDLASATKDWIPTKPAKKT 412
           Y    + +P    +   ++++  S +    ++  SN +T    + SA   + P     + 
Sbjct: 284 YPAVTSVQPNVPASSIPSYTSSSSYNSTSASYTGSNYSTYDASVYSAADSYYPAPQQLQP 343

Query: 413 HDQEPEMMVPL---------LLQPNEMKHLGKP----------CGIPTRPRSELKRKARR 535
             Q P    P+         L QP ++  L KP          CGI T   S   +K   
Sbjct: 344 PLQPPPQPQPITPQQQHPQPLPQPLQLPPLPKPTGPSLWANVGCGISTSSVSSFPKKPPF 403

Query: 536 CNQQ--PQSSMKKAAEDLRCEVCEISCSSKATLQQHLMGRPHKAKLLYKRGCNGDAKG-- 703
            N+Q  P+  +K+  +   C++C+ISC+   T ++HL G+ HK K   ++  N    G  
Sbjct: 404 QNKQLKPKGPLKQP-QLYYCDICKISCAGPQTYREHLEGQKHKKKEAAQKLGNQSNIGLR 462

Query: 704 ----KPRCDVCQIWCSDRDGLNMHFKGQKHKAKLQLCHNNGGHRVSKSPIM 844
               +  C++C + C+  D    H +G KH+  ++L    G    S  P++
Sbjct: 463 GVQTQLHCELCDVSCTGADAYAAHIRGSKHQKVIKLHTKLGKPIPSVEPVL 513


>ref|XP_002298509.1| predicted protein [Populus trichocarpa] gi|222845767|gb|EEE83314.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 37/138 (26%), Positives = 60/138 (43%)
 Frame = +2

Query: 512 ELKRKARRCNQQPQSSMKKAAEDLRCEVCEISCSSKATLQQHLMGRPHKAKLLYKRGCNG 691
           E K++ ++ N      ++      RC +C +SC+S+  +  HL G  H    +       
Sbjct: 447 EAKKQGKQENPMKSLFVEIRNSKWRCTICNVSCTSEGDMACHLKGNKHLDVSI------- 499

Query: 692 DAKGKPRCDVCQIWCSDRDGLNMHFKGQKHKAKLQLCHNNGGHRVSKSPIMCQLCHVPCM 871
               K RC +C + C+    L  H KG KH A            VS S   C +C+V C 
Sbjct: 500 ---SKWRCTICNVNCTSEGDLACHLKGNKHLA------------VSISKWQCTICNVNCT 544

Query: 872 NEDLFNMHLKGKQHITKV 925
           +E   + HL G +H+ ++
Sbjct: 545 SEGDIHCHLNGNKHLARM 562


>ref|XP_003381809.1| zinc finger protein [Trichinella spiralis]
           gi|316979330|gb|EFV62137.1| zinc finger protein
           [Trichinella spiralis]
          Length = 658

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
 Frame = +2

Query: 461 EMKHLGKPCGIPTRPRSELKRKAR--RCNQQPQSSMKKAAEDLRCEVCEISCSSKATLQQ 634
           EM+ +   CG      + L+   +  R N       KK+ +   C++C+I+C  K T   
Sbjct: 142 EMRSIELHCGKIVNANTNLRGSEQKGRANLSMAQRAKKSRKQYACDLCKITCDGKDTFNF 201

Query: 635 HLMGRPHKAKLL----YKRGCNGDAKGKP---RCDVCQIWCSDRDGLNMHFKGQKHKAKL 793
           H+ G+ HK ++L     +R C+           C++CQI C+    L MHFKG KH   L
Sbjct: 202 HISGQRHKKRVLQLARVQRNCSTSVTSSTPLYYCEICQISCTSSLALMMHFKGGKHNKVL 261

Query: 794 Q 796
           +
Sbjct: 262 R 262


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