BLASTX nr result

ID: Scutellaria23_contig00019145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019145
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   125   3e-27
emb|CBI17644.3| unnamed protein product [Vitis vinifera]              125   3e-27
emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]   125   3e-27
ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat...   107   8e-22
ref|NP_196557.1| pentatricopeptide repeat-containing protein [Ar...   107   1e-21

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = -2

Query: 243 SGYAMHGYGKEAIQLFELMRLEGTKPNEVSFLGLLTACTHAGLVEDGCKYFKMMRDVYGL 64
           SG A+HG G+EA++LFELM  EG  PNEVSF+G+LTAC+HAGL+E+GCKYF++MR+VYG+
Sbjct: 710 SGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGI 769

Query: 63  QPSIDHFVCMIDLLGRAGRL 4
           +P  +HF CM+DL GRAGRL
Sbjct: 770 RPGAEHFTCMVDLYGRAGRL 789


>emb|CBI17644.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = -2

Query: 243 SGYAMHGYGKEAIQLFELMRLEGTKPNEVSFLGLLTACTHAGLVEDGCKYFKMMRDVYGL 64
           SG A+HG G+EA++LFELM  EG  PNEVSF+G+LTAC+HAGL+E+GCKYF++MR+VYG+
Sbjct: 407 SGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGI 466

Query: 63  QPSIDHFVCMIDLLGRAGRL 4
           +P  +HF CM+DL GRAGRL
Sbjct: 467 RPGAEHFTCMVDLYGRAGRL 486


>emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
          Length = 871

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = -2

Query: 243 SGYAMHGYGKEAIQLFELMRLEGTKPNEVSFLGLLTACTHAGLVEDGCKYFKMMRDVYGL 64
           SG A+HG G+EA++LFELM  EG  PNEVSF+G+LTAC+HAGL+E+GCKYF++MR+VYG+
Sbjct: 420 SGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGI 479

Query: 63  QPSIDHFVCMIDLLGRAGRL 4
           +P  +HF CM+DL GRAGRL
Sbjct: 480 RPGAEHFTCMVDLYGRAGRL 499


>ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 1011

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/80 (58%), Positives = 61/80 (76%)
 Frame = -2

Query: 243 SGYAMHGYGKEAIQLFELMRLEGTKPNEVSFLGLLTACTHAGLVEDGCKYFKMMRDVYGL 64
           SGYA+HG G  AI LFE M  +G  PNEV+FLG+L AC+HAGL+E+GC+YF+MM+D Y +
Sbjct: 713 SGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCI 772

Query: 63  QPSIDHFVCMIDLLGRAGRL 4
            P ++H   M+DL GRAG L
Sbjct: 773 NPGVEHCTSMVDLYGRAGHL 792


>ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g09950 gi|9758973|dbj|BAB09416.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332004087|gb|AED91470.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/81 (60%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = -2

Query: 243 SGYAMHGYGKEAIQLFELMRLEG-TKPNEVSFLGLLTACTHAGLVEDGCKYFKMMRDVYG 67
           SGYA HG G+EA++LFE M+L+G T P+ V+F+G+L+AC+HAGL+E+G K+F+ M D YG
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 752

Query: 66  LQPSIDHFVCMIDLLGRAGRL 4
           L P I+HF CM D+LGRAG L
Sbjct: 753 LAPRIEHFSCMADVLGRAGEL 773


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