BLASTX nr result

ID: Scutellaria23_contig00019069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019069
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ri...   122   6e-27
ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-26
ref|XP_002866709.1| WD-40 repeat family protein [Arabidopsis lyr...   115   3e-25
ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
emb|CBI33743.3| unnamed protein product [Vitis vinifera]              115   9e-25

>ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ricinus communis]
           gi|223535779|gb|EEF37441.1| Polyadenylation factor
           subunit, putative [Ricinus communis]
          Length = 582

 Score =  122 bits (305), Expect(2) = 6e-27
 Identities = 59/73 (80%), Positives = 63/73 (86%)
 Frame = -2

Query: 476 ELNYLIFRYLNESGFTHSAFALGYEAGINKSTIDGNLVPPGALVTFVQKGIQYLELEANL 297
           ELNYL+FRYL ESGFTHSAFALGYEAGINK TIDGN+VPPGAL+TFVQKGIQYLE+EANL
Sbjct: 8   ELNYLVFRYLQESGFTHSAFALGYEAGINKCTIDGNMVPPGALITFVQKGIQYLEMEANL 67

Query: 296 SNEXXXXXXDFQF 258
           SN       DF F
Sbjct: 68  SNSDADVDEDFSF 80



 Score = 25.0 bits (53), Expect(2) = 6e-27
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = -1

Query: 165 PLDLITKDVDXXXXXXXXXXXXXXXXXXKGKEKE---NIENGREHDRRLAIEKDKE 7
           PLDLITKDV                   K KEK+   + E  REH+R     ++KE
Sbjct: 83  PLDLITKDVYELRQMIKDKKKNLHKDREKEKEKDKNKDKEFEREHERERTRIREKE 138


>ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|222855941|gb|EEE93488.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  119 bits (298), Expect(2) = 1e-26
 Identities = 56/73 (76%), Positives = 62/73 (84%)
 Frame = -2

Query: 476 ELNYLIFRYLNESGFTHSAFALGYEAGINKSTIDGNLVPPGALVTFVQKGIQYLELEANL 297
           ELNYL+FRYL ESGFTHSAFALGYE GINK TIDGN++PPGAL+TFVQKG+QYLE+EANL
Sbjct: 8   ELNYLVFRYLQESGFTHSAFALGYEGGINKCTIDGNMIPPGALITFVQKGLQYLEMEANL 67

Query: 296 SNEXXXXXXDFQF 258
           SN       DF F
Sbjct: 68  SNSDADVDEDFSF 80



 Score = 26.6 bits (57), Expect(2) = 1e-26
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = -1

Query: 165 PLDLITKDVDXXXXXXXXXXXXXXXXXXKGKEKENIENGREHDRRLAIEKDKE 7
           PLDLITKDV+                  K KEKE     ++ DR    +KDKE
Sbjct: 83  PLDLITKDVNELQQIIKEKKKNLHKDREKEKEKE-----KDKDRDKDKDKDKE 130


>ref|XP_002866709.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312544|gb|EFH42968.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 617

 Score =  115 bits (287), Expect(2) = 3e-25
 Identities = 54/73 (73%), Positives = 61/73 (83%)
 Frame = -2

Query: 476 ELNYLIFRYLNESGFTHSAFALGYEAGINKSTIDGNLVPPGALVTFVQKGIQYLELEANL 297
           ELN+L+FRYL ESGFTHSAF LGYEAGINKS IDGN+VPPGAL+ FVQKG+QY+E+EANL
Sbjct: 8   ELNFLVFRYLQESGFTHSAFTLGYEAGINKSNIDGNMVPPGALIKFVQKGLQYMEMEANL 67

Query: 296 SNEXXXXXXDFQF 258
           SN       DF F
Sbjct: 68  SNSEVDIDEDFSF 80



 Score = 26.6 bits (57), Expect(2) = 3e-25
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -1

Query: 165 PLDLITKDVDXXXXXXXXXXXXXXXXXXKGKEKENIENGREHDRRLAIEKDKEI 4
           PLDLI+KDV                     +EK+  E  RE +R  + E DKE+
Sbjct: 83  PLDLISKDVKELQDML--------------REKKRKERDREKERDRSKENDKEV 122


>ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|222831838|gb|EEE70315.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  118 bits (295), Expect(2) = 6e-25
 Identities = 56/73 (76%), Positives = 62/73 (84%)
 Frame = -2

Query: 476 ELNYLIFRYLNESGFTHSAFALGYEAGINKSTIDGNLVPPGALVTFVQKGIQYLELEANL 297
           ELNYL+FRYL ESGFTHSAF LGYEAGINK TIDGN+VPPGAL++FVQKG+QYLE+EANL
Sbjct: 8   ELNYLVFRYLQESGFTHSAFVLGYEAGINKCTIDGNMVPPGALISFVQKGLQYLEMEANL 67

Query: 296 SNEXXXXXXDFQF 258
           SN       DF F
Sbjct: 68  SNSDADVDEDFSF 80



 Score = 22.3 bits (46), Expect(2) = 6e-25
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = -1

Query: 165 PLDLITKDVD 136
           PLDLITKDV+
Sbjct: 83  PLDLITKDVN 92


>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score =  115 bits (288), Expect(2) = 9e-25
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = -2

Query: 476 ELNYLIFRYLNESGFTHSAFALGYEAGINKSTIDGNLVPPGALVTFVQKGIQYLELEANL 297
           ELNYL+FRYL+ESGFTHSAF+LGYEAGINK  IDGN+VPPGAL+TFVQKG+Q++E+EANL
Sbjct: 8   ELNYLVFRYLHESGFTHSAFSLGYEAGINKCPIDGNMVPPGALITFVQKGLQFVEMEANL 67

Query: 296 SNEXXXXXXDFQF 258
           SN       DF F
Sbjct: 68  SNSDTDVDDDFSF 80



 Score = 24.3 bits (51), Expect(2) = 9e-25
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -1

Query: 165 PLDLITKDVDXXXXXXXXXXXXXXXXXXKGKEKENIENGREHDRRLAIEKDKE 7
           PLDLITKDV                   K  +KE+       +R+   EK+KE
Sbjct: 83  PLDLITKDVHQLRQMIREKKRNLQKEKDKESDKEHELRQERQERQERQEKEKE 135


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