BLASTX nr result

ID: Scutellaria23_contig00019063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00019063
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353898.1| photosystem II protein K (chloroplast) [Tect...   125   1e-26
gb|AEC11007.1| photosystem II protein K [Camellia sinensis]           123   6e-26
prf||1211235D ORF 98                                                  120   3e-25
emb|CAA31277.2| K protein [Spinacia oleracea] gi|226076|prf||141...   120   3e-25
ref|YP_007317231.1| photosystem II protein K (chloroplast) [Came...   118   2e-24

>ref|YP_007353898.1| photosystem II protein K (chloroplast) [Tectona grandis]
           gi|438687587|emb|CCP47113.1| photosystem II protein K
           (chloroplast) [Tectona grandis]
           gi|438688271|emb|CCP47202.1| photosystem II protein K
           (chloroplast) [Tectona grandis]
           gi|438688395|emb|CCP47291.1| photosystem II protein K
           (chloroplast) [Tectona grandis]
          Length = 64

 Score =  125 bits (314), Expect = 1e-26
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -2

Query: 718 MSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 539
           MSVMLNIVSLICICI+S LYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA
Sbjct: 1   MSVMLNIVSLICICISSTLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 60

Query: 538 VSFR 527
           VSFR
Sbjct: 61  VSFR 64


>gb|AEC11007.1| photosystem II protein K [Camellia sinensis]
          Length = 64

 Score =  123 bits (308), Expect = 6e-26
 Identities = 61/64 (95%), Positives = 61/64 (95%)
 Frame = -2

Query: 718 MSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 539
           MSVMLNI SLICICINS LYSSSFFF KLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA
Sbjct: 1   MSVMLNIFSLICICINSALYSSSFFFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 60

Query: 538 VSFR 527
           VSFR
Sbjct: 61  VSFR 64


>prf||1211235D ORF 98
          Length = 98

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = -2

Query: 784 PYLLSFSLYQKRNQNAIISKNKMSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNP 605
           P+L+S +    +++   +SKNK SVMLN  SLI IC+NS L+SSSFFFGKLPEAYAFLNP
Sbjct: 17  PFLISIT----QSKCNYLSKNKKSVMLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNP 72

Query: 604 IVDVMPVIPVLFFLLAFVWQAAVSFR 527
           IVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct: 73  IVDIMPVIPLFFFLLAFVWQAAVSFR 98


>emb|CAA31277.2| K protein [Spinacia oleracea] gi|226076|prf||1410212A photosystem
           II low MW protein
          Length = 98

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = -2

Query: 784 PYLLSFSLYQKRNQNAIISKNKMSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNP 605
           P+L+S +    +++   +SKNK SVMLN  SLI IC+NS L+SSSFFFGKLPEAYAFLNP
Sbjct: 17  PFLISIT----QSKCNYLSKNKKSVMLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNP 72

Query: 604 IVDVMPVIPVLFFLLAFVWQAAVSFR 527
           IVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct: 73  IVDIMPVIPLFFFLLAFVWQAAVSFR 98


>ref|YP_007317231.1| photosystem II protein K (chloroplast) [Camellia sinensis]
           gi|430728255|gb|AGA55579.1| photosystem II protein K
           (chloroplast) [Camellia sinensis]
          Length = 61

 Score =  118 bits (295), Expect = 2e-24
 Identities = 58/61 (95%), Positives = 58/61 (95%)
 Frame = -2

Query: 709 MLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSF 530
           MLNI SLICICINS LYSSSFFF KLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSF
Sbjct: 1   MLNIFSLICICINSALYSSSFFFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSF 60

Query: 529 R 527
           R
Sbjct: 61  R 61


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