BLASTX nr result

ID: Scutellaria23_contig00018970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018970
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171307.1| PREDICTED: pentatricopeptide repeat-containi...   130   4e-28
ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containi...   130   4e-28
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
ref|XP_002310993.1| predicted protein [Populus trichocarpa] gi|2...   123   4e-26
ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containi...   122   8e-26

>ref|XP_004171307.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 398

 Score =  130 bits (326), Expect = 4e-28
 Identities = 61/95 (64%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +1

Query: 475 NETED-EVFGNSEENDKEVEVREKGKIFVGNLPLWIKKNEVAEFFRQFGPIKNVIVVKGH 651
           NE E+ E   +S +  +EV+ R++GKIFVGNLP WIKK+EV EFFRQFGP+KNVI++KGH
Sbjct: 143 NEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKKHEVQEFFRQFGPVKNVILIKGH 202

Query: 652 EELERNMGFGFVIYSGDMAEKAAMKAVEFDGVEFH 756
             +ERN G+GF+IY G  A+K+A+KAVEFDGVEFH
Sbjct: 203 NAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFH 237


>ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  130 bits (326), Expect = 4e-28
 Identities = 61/95 (64%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +1

Query: 475 NETED-EVFGNSEENDKEVEVREKGKIFVGNLPLWIKKNEVAEFFRQFGPIKNVIVVKGH 651
           NE E+ E   +S +  +EV+ R++GKIFVGNLP WIKK+EV EFFRQFGP+KNVI++KGH
Sbjct: 143 NEIEEIESDNSSSKGRREVQFRQEGKIFVGNLPNWIKKHEVQEFFRQFGPVKNVILIKGH 202

Query: 652 EELERNMGFGFVIYSGDMAEKAAMKAVEFDGVEFH 756
             +ERN G+GF+IY G  A+K+A+KAVEFDGVEFH
Sbjct: 203 NAVERNAGYGFIIYDGLTADKSAIKAVEFDGVEFH 237


>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  129 bits (325), Expect = 5e-28
 Identities = 61/102 (59%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
 Frame = +1

Query: 457 EESIVENET--EDEVFGNSEENDKEVEVREKGKIFVGNLPLWIKKNEVAEFFRQFGPIKN 630
           +E+I +NE      +     +   E+E R++GKIFVGNLP W+KKNEV+EFFRQFGPI+N
Sbjct: 115 QETIDDNEVTVSSNLDNLCSDGSPEIEFRQEGKIFVGNLPNWVKKNEVSEFFRQFGPIEN 174

Query: 631 VIVVKGHEELERNMGFGFVIYSGDMAEKAAMKAVEFDGVEFH 756
           VI++KGH + +RN GFGFVIY G MA  +AM+AVEFDGVEFH
Sbjct: 175 VILIKGHNDNQRNAGFGFVIYGGPMASGSAMRAVEFDGVEFH 216


>ref|XP_002310993.1| predicted protein [Populus trichocarpa] gi|222850813|gb|EEE88360.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score =  123 bits (309), Expect = 4e-26
 Identities = 56/93 (60%), Positives = 70/93 (75%)
 Frame = +1

Query: 478 ETEDEVFGNSEENDKEVEVREKGKIFVGNLPLWIKKNEVAEFFRQFGPIKNVIVVKGHEE 657
           E E +     E    + +  +KGKIF+GNLP WIKK+E++EFFRQFGPIKNV+++ GH E
Sbjct: 136 EAETQETRKVENEAPKTDFCQKGKIFIGNLPNWIKKHELSEFFRQFGPIKNVVLINGHNE 195

Query: 658 LERNMGFGFVIYSGDMAEKAAMKAVEFDGVEFH 756
            ERN GFGF+IY G  AEK+AMKA EFDG+EFH
Sbjct: 196 TERNAGFGFIIYDGPTAEKSAMKAEEFDGMEFH 228


>ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  122 bits (306), Expect = 8e-26
 Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 4/103 (3%)
 Frame = +1

Query: 460 ESIVENETEDEVFGNSEENDKEVEVREKGKIFVGNLPLWIKKNEVAEFFRQFGPIKNVIV 639
           +S +E ET+      +  + +  + R+ GKIFVGNLP W+KK +VAEFFRQFGPI++VI+
Sbjct: 106 DSEIETETDKASGDGANSDSRNSDFRQPGKIFVGNLPAWVKKPQVAEFFRQFGPIRSVIL 165

Query: 640 VKGHEELERNMGFGFVIYSG----DMAEKAAMKAVEFDGVEFH 756
           +KGH + ER+ GF FVIY G    D A+KAAM+AVEFDGVEFH
Sbjct: 166 IKGHHDTERSAGFAFVIYDGVESDDEADKAAMRAVEFDGVEFH 208


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