BLASTX nr result

ID: Scutellaria23_contig00018898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018898
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   250   7e-65
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   249   1e-64
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...   248   4e-64
gb|AFW71552.1| putative DNA polymerase epsilon catalytic subunit...   244   4e-63
gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit...   244   4e-63

>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  250 bits (639), Expect = 7e-65
 Identities = 120/170 (70%), Positives = 139/170 (81%), Gaps = 3/170 (1%)
 Frame = -1

Query: 501  LHVKGRNKSQSDPNENL---QSSNNTQKGVSALDFIKYVCAVLALDQKVQHEVLVMRRNL 331
            LH+KG NKS++    +L   Q +    KG  AL+FIK+VCAVLALDQ VQHEVLVMR+NL
Sbjct: 2012 LHMKGINKSENGQQISLGIQQPAGMNHKGDPALEFIKHVCAVLALDQHVQHEVLVMRKNL 2071

Query: 330  LKLVRIREFAPEAEFHNLNVPLTIPNVICSYCNDCRDLDLSRDRALTGQEWRCGVAQCGQ 151
            LK VR+REFAPEAEFH+      +PNVICSYCNDCRDLDL RD A+  +EWRC V QCGQ
Sbjct: 2072 LKYVRVREFAPEAEFHDPCPSFILPNVICSYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQ 2131

Query: 150  PYDREVMENSLLQIIRQRERLYHLQDLVCLKCNHIKAAHLAEHCSCAGSF 1
            PYDREVMEN+LLQI+RQRERLYHLQDLVCL+CN +KAAHL+E CSCAGS+
Sbjct: 2132 PYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLSEQCSCAGSY 2181


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  249 bits (637), Expect = 1e-64
 Identities = 120/169 (71%), Positives = 139/169 (82%), Gaps = 2/169 (1%)
 Frame = -1

Query: 501  LHVKGRNKSQSD-PNENL-QSSNNTQKGVSALDFIKYVCAVLALDQKVQHEVLVMRRNLL 328
            LH+KG NKS++D P+    Q + N  K V AL+FIK+VCAVLALD  VQHEVLVMR+NLL
Sbjct: 2020 LHMKGINKSENDQPSSGFPQVAGNIHKRVPALEFIKHVCAVLALDLNVQHEVLVMRKNLL 2079

Query: 327  KLVRIREFAPEAEFHNLNVPLTIPNVICSYCNDCRDLDLSRDRALTGQEWRCGVAQCGQP 148
            K VR+REFAPEAEFH+      +PNVICSYCNDCRDLDL RD AL  QEWRC V QCGQP
Sbjct: 2080 KYVRVREFAPEAEFHDPCPSFVLPNVICSYCNDCRDLDLCRDTALLAQEWRCAVPQCGQP 2139

Query: 147  YDREVMENSLLQIIRQRERLYHLQDLVCLKCNHIKAAHLAEHCSCAGSF 1
            YDRE MEN+LLQI+RQRERLYHLQDLVC++CN +KAAHLAE C+CAG++
Sbjct: 2140 YDREGMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQCACAGAY 2188


>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
            gi|241931984|gb|EES05129.1| hypothetical protein
            SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score =  248 bits (633), Expect = 4e-64
 Identities = 113/166 (68%), Positives = 136/166 (81%)
 Frame = -1

Query: 498  HVKGRNKSQSDPNENLQSSNNTQKGVSALDFIKYVCAVLALDQKVQHEVLVMRRNLLKLV 319
            H KG++K +SD   N +S  +T KG +AL+FIK+VCAVLALDQ VQH++L MR+NLLKLV
Sbjct: 1931 HFKGKSKHESDEPANRESDPHTHKGDAALEFIKHVCAVLALDQNVQHDILRMRKNLLKLV 1990

Query: 318  RIREFAPEAEFHNLNVPLTIPNVICSYCNDCRDLDLSRDRALTGQEWRCGVAQCGQPYDR 139
            R++EFAPEA+F +     T+PNVICSYCNDCRDLDL RD  L GQEWRC V QCGQPY R
Sbjct: 1991 RVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHR 2050

Query: 138  EVMENSLLQIIRQRERLYHLQDLVCLKCNHIKAAHLAEHCSCAGSF 1
            E MEN+LLQ++RQRERLYHLQDLVC++C  +KAAHL+E CSC GSF
Sbjct: 2051 EQMENALLQVVRQRERLYHLQDLVCVRCRQVKAAHLSEQCSCGGSF 2096


>gb|AFW71552.1| putative DNA polymerase epsilon catalytic subunit family protein
           [Zea mays]
          Length = 288

 Score =  244 bits (624), Expect = 4e-63
 Identities = 113/166 (68%), Positives = 137/166 (82%)
 Frame = -1

Query: 498 HVKGRNKSQSDPNENLQSSNNTQKGVSALDFIKYVCAVLALDQKVQHEVLVMRRNLLKLV 319
           H KG++K +SD  E  +S  +T KG +AL+FIK++CAVLALDQ VQH++L MR+NLLKLV
Sbjct: 86  HFKGKSKHESD--EPAKSDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLV 143

Query: 318 RIREFAPEAEFHNLNVPLTIPNVICSYCNDCRDLDLSRDRALTGQEWRCGVAQCGQPYDR 139
           R++EFAPEA+F +     T+PNVICSYCNDCRDLDL RD AL GQEWRC V QCGQPY R
Sbjct: 144 RVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSALQGQEWRCAVPQCGQPYHR 203

Query: 138 EVMENSLLQIIRQRERLYHLQDLVCLKCNHIKAAHLAEHCSCAGSF 1
           E MEN+LLQ++RQRERLYHLQDLVC++C  +KAAHL+E CSC GSF
Sbjct: 204 EQMENALLQVVRQRERLYHLQDLVCVRCRQVKAAHLSEQCSCGGSF 249


>gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
            mays]
          Length = 1717

 Score =  244 bits (624), Expect = 4e-63
 Identities = 113/166 (68%), Positives = 137/166 (82%)
 Frame = -1

Query: 498  HVKGRNKSQSDPNENLQSSNNTQKGVSALDFIKYVCAVLALDQKVQHEVLVMRRNLLKLV 319
            H KG++K +SD  E  +S  +T KG +AL+FIK++CAVLALDQ VQH++L MR+NLLKLV
Sbjct: 1515 HFKGKSKHESD--EPAKSDPHTHKGDAALEFIKHICAVLALDQNVQHDILRMRKNLLKLV 1572

Query: 318  RIREFAPEAEFHNLNVPLTIPNVICSYCNDCRDLDLSRDRALTGQEWRCGVAQCGQPYDR 139
            R++EFAPEA+F +     T+PNVICSYCNDCRDLDL RD AL GQEWRC V QCGQPY R
Sbjct: 1573 RVKEFAPEAQFQDPCASFTLPNVICSYCNDCRDLDLCRDSALQGQEWRCAVPQCGQPYHR 1632

Query: 138  EVMENSLLQIIRQRERLYHLQDLVCLKCNHIKAAHLAEHCSCAGSF 1
            E MEN+LLQ++RQRERLYHLQDLVC++C  +KAAHL+E CSC GSF
Sbjct: 1633 EQMENALLQVVRQRERLYHLQDLVCVRCRQVKAAHLSEQCSCGGSF 1678


Top