BLASTX nr result

ID: Scutellaria23_contig00018746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018746
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524493.1| conserved hypothetical protein [Ricinus comm...    86   2e-23
ref|XP_002324656.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-21
ref|XP_002308084.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-20
gb|AAC23732.1| unknown protein [Arabidopsis thaliana]                  78   3e-20
ref|NP_001118501.1| Embryo-specific protein 3, (ATS3) [Arabidops...    78   3e-20

>ref|XP_002524493.1| conserved hypothetical protein [Ricinus communis]
           gi|223536281|gb|EEF37933.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score = 85.5 bits (210), Expect(2) = 2e-23
 Identities = 35/60 (58%), Positives = 46/60 (76%)
 Frame = -2

Query: 272 GKCMDVICYLYLMKNGSDGWKPESVKIYGPDFRTLHFHFDTFLPDGLWFGMTSCIPTSHS 93
           G C   ICYLYL++ GSDGWKPESVKIYGP+ +T++F ++TFLP+G+W+G   C   S S
Sbjct: 105 GPCTYGICYLYLLRRGSDGWKPESVKIYGPNTKTINFKYNTFLPNGVWYGFNLCRHASSS 164



 Score = 48.9 bits (115), Expect(2) = 2e-23
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
 Frame = -1

Query: 546 MVNYCLWFLPFVAF-FFTPSVQVLANQSPITIHS------NQTEIRRCWYRVVMETSCSS 388
           MV    + L FV F   +P    ++   P  ++S           R C Y VV++TSCSS
Sbjct: 1   MVKLLSFLLIFVFFSIISPPATSVSPPQPHLLNSFPPKSIQAANARSCSYTVVVKTSCSS 60

Query: 387 VAHTTDQITLAFGDAYGAE 331
            ++T D+I+LAFGD+YG E
Sbjct: 61  SSYTRDKISLAFGDSYGNE 79


>ref|XP_002324656.1| predicted protein [Populus trichocarpa] gi|222866090|gb|EEF03221.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 82.0 bits (201), Expect(2) = 2e-21
 Identities = 32/62 (51%), Positives = 47/62 (75%)
 Frame = -2

Query: 272 GKCMDVICYLYLMKNGSDGWKPESVKIYGPDFRTLHFHFDTFLPDGLWFGMTSCIPTSHS 93
           G C+D +CYLY+++ G+DGWKPESVKIYG   +T+ F+++ FLP+G+W+G   C   S S
Sbjct: 105 GPCVDDVCYLYMLRTGADGWKPESVKIYGSYTKTVTFNYNKFLPNGVWYGFNVCGRASES 164

Query: 92  AL 87
           A+
Sbjct: 165 AI 166



 Score = 45.8 bits (107), Expect(2) = 2e-21
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = -1

Query: 432 RRCWYRVVMETSCSSVAHTTDQITLAFGDAYGAE 331
           + C Y +V++TSCSS  +T D+I+LAFGD+YG E
Sbjct: 46  KSCPYELVIKTSCSSTTYTRDKISLAFGDSYGNE 79


>ref|XP_002308084.1| predicted protein [Populus trichocarpa] gi|222854060|gb|EEE91607.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score = 80.5 bits (197), Expect(2) = 1e-20
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = -2

Query: 272 GKCMDVICYLYLMKNGSDGWKPESVKIYGPDFRTLHFHFDTFLPDGLWFGMTSCIPTSHS 93
           G C+  ICYLY+++ G DGWKPESVKIYGP  +T+ F+++ FLP+G+W+G   C+  S S
Sbjct: 105 GPCVYDICYLYMLRTGYDGWKPESVKIYGPYTKTVKFNYNKFLPNGVWYGFNVCVRASLS 164



 Score = 44.3 bits (103), Expect(2) = 1e-20
 Identities = 18/34 (52%), Positives = 27/34 (79%)
 Frame = -1

Query: 432 RRCWYRVVMETSCSSVAHTTDQITLAFGDAYGAE 331
           + C Y +V++TSC+S  +T D+I+LAFGD+YG E
Sbjct: 46  KSCPYTLVIKTSCTSTTYTRDKISLAFGDSYGNE 79


>gb|AAC23732.1| unknown protein [Arabidopsis thaliana]
          Length = 365

 Score = 77.8 bits (190), Expect(2) = 3e-20
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = -2

Query: 272 GKCMDVICYLYLMKNGSDGWKPESVKIYGPDFRTLHFHFDTFLPDGLWFGMTSC 111
           G CM  +CYLYL++ GSDGWKPE+VKIYG   R++ F+++ FLP+ +W+G   C
Sbjct: 105 GPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158



 Score = 45.8 bits (107), Expect(2) = 3e-20
 Identities = 18/32 (56%), Positives = 27/32 (84%)
 Frame = -1

Query: 426 CWYRVVMETSCSSVAHTTDQITLAFGDAYGAE 331
           C Y V+++TSCSSV++T D+I+++FGD YG E
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNE 79


>ref|NP_001118501.1| Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana]
           gi|51968470|dbj|BAD42927.1| unknown protein [Arabidopsis
           thaliana] gi|51969372|dbj|BAD43378.1| unknown protein
           [Arabidopsis thaliana] gi|51969672|dbj|BAD43528.1|
           unknown protein [Arabidopsis thaliana]
           gi|62320996|dbj|BAD94040.1| hypothetical protein
           [Arabidopsis thaliana] gi|62321118|dbj|BAD94228.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110736474|dbj|BAF00205.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254894|gb|AEC09988.1|
           Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana]
          Length = 179

 Score = 77.8 bits (190), Expect(2) = 3e-20
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = -2

Query: 272 GKCMDVICYLYLMKNGSDGWKPESVKIYGPDFRTLHFHFDTFLPDGLWFGMTSC 111
           G CM  +CYLYL++ GSDGWKPE+VKIYG   R++ F+++ FLP+ +W+G   C
Sbjct: 105 GPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158



 Score = 45.8 bits (107), Expect(2) = 3e-20
 Identities = 18/32 (56%), Positives = 27/32 (84%)
 Frame = -1

Query: 426 CWYRVVMETSCSSVAHTTDQITLAFGDAYGAE 331
           C Y V+++TSCSSV++T D+I+++FGD YG E
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNE 79


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