BLASTX nr result

ID: Scutellaria23_contig00018575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018575
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding prote...   187   4e-62
ref|XP_002529947.1| double-stranded RNA binding protein, putativ...   185   1e-61
ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   186   2e-61
ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote...   187   4e-61
emb|CBI16317.3| unnamed protein product [Vitis vinifera]              187   4e-61

>ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 393

 Score =  187 bits (475), Expect(2) = 4e-62
 Identities = 98/166 (59%), Positives = 115/166 (69%)
 Frame = +2

Query: 263 GVYKNLLQEIAQRVGSPLPRYTTYRHGLGHLPVFTGIVELAGITFKGEPXXXXXXXXXXX 442
           GVYKNLLQEIAQRVG+PLP YTTYR GLGHLPVFTGIVELAGITF GEP           
Sbjct: 86  GVYKNLLQEIAQRVGAPLPHYTTYRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNA 145

Query: 443 XXXXWLSLKQLAQQDASSSSEHENTEEQEQIRIARALQNYHIKEKFKMANSNSISLPFQR 622
               W +LKQLA++ ASSS+E EN +E EQI IARAL NY +KEK  M+N N+  LPF  
Sbjct: 146 AMAAWSALKQLAKETASSSTEPENNDEVEQITIARALLNYRLKEKMTMSNPNA-PLPFHE 204

Query: 623 NFSVPTPRSSSPQHPTISTSKILPLFCQKNASQNKPSSMISDTHST 760
            F +  PR  S Q P  ++SKILPL CQK A ++KPS   + T+ +
Sbjct: 205 RFQIQNPRPISSQPPPATSSKILPLICQKTAPRSKPSLATTTTNES 250



 Score = 77.4 bits (189), Expect(2) = 4e-62
 Identities = 38/56 (67%), Positives = 41/56 (73%)
 Frame = +3

Query: 3   APRFKAIVNFNGETFDTPHFCSNLRQXXXXXXXXXLISLSSRAPSHSLAARILDET 170
           APRFKA VNFNGE F+TPH+CS LRQ         L SLS R PSHSLAA+ILDET
Sbjct: 30  APRFKATVNFNGEIFETPHYCSTLRQAEHSAAEAALNSLSHRGPSHSLAAKILDET 85


>ref|XP_002529947.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223530577|gb|EEF32455.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 464

 Score =  185 bits (470), Expect(2) = 1e-61
 Identities = 96/162 (59%), Positives = 113/162 (69%)
 Frame = +2

Query: 263 GVYKNLLQEIAQRVGSPLPRYTTYRHGLGHLPVFTGIVELAGITFKGEPXXXXXXXXXXX 442
           GVYKNLLQEIAQRVG+PLP+YTT+R GLGH PVFTG VELAGITF GEP           
Sbjct: 86  GVYKNLLQEIAQRVGAPLPQYTTFRSGLGHQPVFTGTVELAGITFTGEPAKNKKQAEKNA 145

Query: 443 XXXXWLSLKQLAQQDASSSSEHENTEEQEQIRIARALQNYHIKEKFKMANSNSISLPFQR 622
               W SLKQLA++DASSSSE EN++E EQI IARAL NY +KEK  +ANS +  +PF +
Sbjct: 146 AMAAWSSLKQLAKEDASSSSEPENSDELEQITIARALLNYRLKEKMAIANSPNSPIPFSK 205

Query: 623 NFSVPTPRSSSPQHPTISTSKILPLFCQKNASQNKPSSMISD 748
            F +  PR +SPQ    +TSKILPLFC K       S+ I+D
Sbjct: 206 KFPMQGPRPTSPQPVPATTSKILPLFCPKTTRNRPTSTTITD 247



 Score = 77.8 bits (190), Expect(2) = 1e-61
 Identities = 38/56 (67%), Positives = 41/56 (73%)
 Frame = +3

Query: 3   APRFKAIVNFNGETFDTPHFCSNLRQXXXXXXXXXLISLSSRAPSHSLAARILDET 170
           APRFKA VNFNGE F+ PH+CS LRQ         L SLS+R PSHSLAARILDET
Sbjct: 30  APRFKATVNFNGEIFECPHYCSTLRQAEHSAAEVALTSLSNRGPSHSLAARILDET 85


>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
           Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  186 bits (473), Expect(2) = 2e-61
 Identities = 99/171 (57%), Positives = 118/171 (69%)
 Frame = +2

Query: 263 GVYKNLLQEIAQRVGSPLPRYTTYRHGLGHLPVFTGIVELAGITFKGEPXXXXXXXXXXX 442
           GVYKNLLQEIAQRVG+PLP+YTTYR GLGHLPVFTGIVELAGITF GEP           
Sbjct: 86  GVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNA 145

Query: 443 XXXXWLSLKQLAQQDASSSSEHENTEEQEQIRIARALQNYHIKEKFKMANSNSISLPFQR 622
               W SLKQLA++ ASSS+E EN +E EQI IARAL NY +KEK  M+N N+  +PFQ+
Sbjct: 146 AMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMSMSNPNA-RIPFQK 204

Query: 623 NFSVPTPRSSSPQHPTISTSKILPLFCQKNASQNKPSSMISDTHSTLSQPR 775
            F +   R +S Q P  +TSKILPL CQK   +N+PSS   + +     P+
Sbjct: 205 KFQIQNIRPTSSQSPA-TTSKILPLICQKTGPRNRPSSATPNENPRSRHPQ 254



 Score = 75.9 bits (185), Expect(2) = 2e-61
 Identities = 37/56 (66%), Positives = 41/56 (73%)
 Frame = +3

Query: 3   APRFKAIVNFNGETFDTPHFCSNLRQXXXXXXXXXLISLSSRAPSHSLAARILDET 170
           APRFKA VNFNGE F++PH+CS LRQ         L SLS R PSHSLAA+ILDET
Sbjct: 30  APRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDET 85


>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
           vinifera]
          Length = 413

 Score =  187 bits (476), Expect(2) = 4e-61
 Identities = 101/172 (58%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
 Frame = +2

Query: 263 GVYKNLLQEIAQRVGSPLPRYTTYRHGLGHLPVFTGIVELAGITFKGEPXXXXXXXXXXX 442
           GVYKNLLQEIAQRVG+PLP+YTT+R GLGHLPVFTG VELAGITF GEP           
Sbjct: 86  GVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNA 145

Query: 443 XXXXWLSLKQLAQQDASSSSEHENTEEQEQIRIARALQNYHIKEKFKMANSNSISLPFQR 622
               W SLKQLA++ A+SSSE EN +E EQI IARAL NY +KEK  +ANS S +L F +
Sbjct: 146 AMAAWSSLKQLAKEAANSSSETENNDELEQITIARALLNYRLKEKMAIANSPSGTLSFPK 205

Query: 623 NFSVPTPRSSSPQHPTISTSKILPLFCQKNASQNK-PSSMISDTHSTLSQPR 775
            F +   R  SPQ P ++TSKILPL CQK   +N+ PS   +D     SQPR
Sbjct: 206 KFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNRPPSPTANDGSMPSSQPR 257



 Score = 73.9 bits (180), Expect(2) = 4e-61
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = +3

Query: 3   APRFKAIVNFNGETFDTPHFCSNLRQXXXXXXXXXLISLSSRAPSHSLAARILDET 170
           APRFKA VNFNGE F++P++C+ LRQ         L SLS+R PSHSLAARILDET
Sbjct: 30  APRFKATVNFNGEIFESPNYCTTLRQAEHSAAEVALNSLSNRGPSHSLAARILDET 85


>emb|CBI16317.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  187 bits (476), Expect(2) = 4e-61
 Identities = 101/172 (58%), Positives = 118/172 (68%), Gaps = 1/172 (0%)
 Frame = +2

Query: 263 GVYKNLLQEIAQRVGSPLPRYTTYRHGLGHLPVFTGIVELAGITFKGEPXXXXXXXXXXX 442
           GVYKNLLQEIAQRVG+PLP+YTT+R GLGHLPVFTG VELAGITF GEP           
Sbjct: 86  GVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNA 145

Query: 443 XXXXWLSLKQLAQQDASSSSEHENTEEQEQIRIARALQNYHIKEKFKMANSNSISLPFQR 622
               W SLKQLA++ A+SSSE EN +E EQI IARAL NY +KEK  +ANS S +L F +
Sbjct: 146 AMAAWSSLKQLAKEAANSSSETENNDELEQITIARALLNYRLKEKMAIANSPSGTLSFPK 205

Query: 623 NFSVPTPRSSSPQHPTISTSKILPLFCQKNASQNK-PSSMISDTHSTLSQPR 775
            F +   R  SPQ P ++TSKILPL CQK   +N+ PS   +D     SQPR
Sbjct: 206 KFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNRPPSPTANDGSMPSSQPR 257



 Score = 73.9 bits (180), Expect(2) = 4e-61
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = +3

Query: 3   APRFKAIVNFNGETFDTPHFCSNLRQXXXXXXXXXLISLSSRAPSHSLAARILDET 170
           APRFKA VNFNGE F++P++C+ LRQ         L SLS+R PSHSLAARILDET
Sbjct: 30  APRFKATVNFNGEIFESPNYCTTLRQAEHSAAEVALNSLSNRGPSHSLAARILDET 85


Top