BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018475
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   482   e-134
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   426   e-117
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   422   e-116
ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ...   398   e-108

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
           [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
           protein product [Vitis vinifera]
          Length = 372

 Score =  482 bits (1241), Expect = e-134
 Identities = 233/291 (80%), Positives = 260/291 (89%), Gaps = 1/291 (0%)
 Frame = +3

Query: 126 PVWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVDNSLRLEEFRNN 305
           P  D+PDVPKG+LPPHI+LQRTRVLC  DAPTHTEN++YSGAY++MGVDNSLR+++F NN
Sbjct: 5   PALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNN 64

Query: 306 FKVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANNTSVIQDEVLAH 485
           F+VEVIRL+EDDMEFDMIGID ++ANAFRRILIAE+PTMAIEKVL ANNTS++QDEVLAH
Sbjct: 65  FRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAH 124

Query: 486 RLGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSSELNWLPGGSEF 665
           RLGLIP+  DPR F+ +SEND PNEKNTIVF LHV CERG  R+ VKS+EL WLP GSEF
Sbjct: 125 RLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEF 184

Query: 666 PL-TENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAKLGAGQEIELEAHA 842
           PL TEN+T+ STSK KTYTSFSC QD+LPEF D  I PKH DII+AKLG GQEIELEAHA
Sbjct: 185 PLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHA 244

Query: 843 VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDIE 995
           VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIE EKAE+LVKKCPV VFDIE
Sbjct: 245 VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIE 295


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
           communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
           polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  426 bits (1096), Expect = e-117
 Identities = 214/304 (70%), Positives = 249/304 (81%)
 Frame = +3

Query: 84  MVSDKKESGKTPKIPVWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAM 263
           M S ++   K  K  +WDLPDVP G+LPPH+QLQRTRV+C  DAP HT+NI YSGAYA++
Sbjct: 1   MSSKQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASI 60

Query: 264 GVDNSLRLEEFRNNFKVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLF 443
           GVDNSL+L+ FR+NFKVEVI+LT+DDMEFDMIGIDAA+ANAFRRILI+E+PTMAIEKVL 
Sbjct: 61  GVDNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLI 120

Query: 444 ANNTSVIQDEVLAHRLGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEV 623
           ANNTS+IQDEVLAHRLGLIP+  DPR F ++S ND PNEKNTIVFKLH +C+RG  R  V
Sbjct: 121 ANNTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTV 180

Query: 624 KSSELNWLPGGSEFPLTENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAK 803
            S EL WLPGGS+  L E+   D  SK  TYTSF+  QD +P+    P++P  D II+AK
Sbjct: 181 YSEELKWLPGGSQL-LKESEKAD--SKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAK 233

Query: 804 LGAGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKV 983
           LG GQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL++IE E AE+L KKCPV V
Sbjct: 234 LGPGQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNV 293

Query: 984 FDIE 995
           FDIE
Sbjct: 294 FDIE 297


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like [Cucumis sativus]
           gi|449522768|ref|XP_004168398.1| PREDICTED: DNA-directed
           RNA polymerases I and III subunit RPAC1-like [Cucumis
           sativus]
          Length = 391

 Score =  422 bits (1086), Expect = e-116
 Identities = 211/290 (72%), Positives = 242/290 (83%), Gaps = 1/290 (0%)
 Frame = +3

Query: 129 VWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVDNSLRLEEFRNNF 308
           + +LPDVP  +LPPH++LQRTRV C  DAP HT+ I+YSGA+A+MG DNSLRL+ FRNNF
Sbjct: 29  IMNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNF 87

Query: 309 KVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANNTSVIQDEVLAHR 488
           K+EVI L EDD+EFDMIGID ALANAFRRILI+E+PTMAIEKVLFANNTS++QDEVLAHR
Sbjct: 88  KIEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHR 147

Query: 489 LGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSSELNWLPGGSEFP 668
           LGL+P++VDPR F + S+ D PNE NTIVF+LH  CERG  R+ V S  L WLP GSEFP
Sbjct: 148 LGLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFP 206

Query: 669 LTENSTTDSTSKIKTYTSFSCGQDTL-PEFQDNPIAPKHDDIILAKLGAGQEIELEAHAV 845
           L  + +  S SK KTYTSFSC Q+TL  EF +NPI PK  DIILA+LG GQEIELEAHAV
Sbjct: 207 LVSDKSV-SNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAV 265

Query: 846 KGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDIE 995
           KGMGKTHAKWSPVATAWYRMLPEVVL++EIE E AE+L KKCPV VFDIE
Sbjct: 266 KGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIE 315


>ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|222847643|gb|EEE85190.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  411 bits (1057), Expect = e-112
 Identities = 206/301 (68%), Positives = 240/301 (79%)
 Frame = +3

Query: 93  DKKESGKTPKIPVWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVD 272
           ++++  K      W+L DV +G+LPPHI+ Q TRV C  DAPT+TE ++YSG+YA+MGVD
Sbjct: 16  EEEQQQKEEGFSYWNLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVD 75

Query: 273 NSLRLEEFRNNFKVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANN 452
           NSLRL+ FR NF+++VI L +D MEFDMIGIDAA+ANAFRRILI+E+PTMAIEKV  ANN
Sbjct: 76  NSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANN 135

Query: 453 TSVIQDEVLAHRLGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSS 632
           TSVIQDEVLAHRLGLIP++VDPR F ++S ND PNEKNTIV KLH  C RG  R  V S 
Sbjct: 136 TSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQ 195

Query: 633 ELNWLPGGSEFPLTENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAKLGA 812
           EL WLP GSEF   E+   D  SK  TYTSFSCGQD+LPEF  NPI+   +DIILAKLG 
Sbjct: 196 ELKWLPNGSEF-AKESEKPD--SKPSTYTSFSCGQDSLPEFAGNPISTV-EDIILAKLGP 251

Query: 813 GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDI 992
           GQEIELEAHAVKGMGKTHAKWSPV TAWYRM PEVVLL+ I+GE AE+L++KCP  VFDI
Sbjct: 252 GQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDI 311

Query: 993 E 995
           E
Sbjct: 312 E 312


>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
           gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 385

 Score =  398 bits (1023), Expect = e-108
 Identities = 198/289 (68%), Positives = 231/289 (79%)
 Frame = +3

Query: 129 VWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVDNSLRLEEFRNNF 308
           ++DLPDVP G LPPH++LQRTR +C  DAP H  ++ YSGAYA+MGVDNS+RLE F  +F
Sbjct: 23  IFDLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDF 81

Query: 309 KVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANNTSVIQDEVLAHR 488
           KV+VI LTE  M FDMIG+ A +ANAFRRIL+AE+P+MAIEKV  ANNTSVIQDEVLAHR
Sbjct: 82  KVDVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHR 141

Query: 489 LGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSSELNWLPGGSEFP 668
           LGLIP+  DPR F ++SEND+PNEKNTIVFKLHV C +G  R +V +SEL WLP GSE  
Sbjct: 142 LGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWLPNGSEL- 200

Query: 669 LTENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAKLGAGQEIELEAHAVK 848
                +   T+K KTYTSFS  QD+ P F  NPI P   DI++AKLG GQEIELEAHAVK
Sbjct: 201 --VKESGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEAHAVK 258

Query: 849 GMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDIE 995
           G+GKTHAKWSPVATAWYRMLPEV+LL+E EG+ AE+LVK CP KVFDIE
Sbjct: 259 GIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIE 307