BLASTX nr result

ID: Scutellaria23_contig00018470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018470
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...    75   4e-12
ref|XP_002869097.1| hypothetical protein ARALYDRAFT_491120 [Arab...    75   7e-12
ref|XP_002306436.1| glutamate-gated kainate-type ion channel rec...    75   7e-12
gb|AFK41266.1| unknown [Lotus japonicus]                               74   2e-11
ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu...    74   2e-11

>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 924

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2    IHDKWLINVRASSCSATPTSVDSEQLDLKSFWALFLISAIACFLALLLYLCSTIYKFKRR 181
            IHDKWL       CS+  +   SEQL L+SFW LFLI  IACFLAL +Y C  + +F R 
Sbjct: 793  IHDKWLAR---KVCSSQISDSGSEQLQLQSFWGLFLICGIACFLALFIYFCMMLRQFSRH 849

Query: 182  LHSRSGQP-TTNNPDRIQNFIMFMDTKEEEQTTK 280
                S     ++   RIQ F+ F+D K +E  +K
Sbjct: 850  APEDSDPSIRSSRSRRIQTFLSFVDEKADESKSK 883


>ref|XP_002869097.1| hypothetical protein ARALYDRAFT_491120 [Arabidopsis lyrata subsp.
            lyrata] gi|297314933|gb|EFH45356.1| hypothetical protein
            ARALYDRAFT_491120 [Arabidopsis lyrata subsp. lyrata]
          Length = 913

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
 Frame = +2

Query: 2    IHDKWLINVRASSCSATPTSVDSEQLDLKSFWALFLISAIACFLALLLYLCSTIYKFKRR 181
            IHDKWL     S+ + + +  DSEQL L+SFW LFL+  IACF+AL +Y    +  F R 
Sbjct: 800  IHDKWLSRSNCSNLNGSESDEDSEQLKLRSFWGLFLVCGIACFIALFIYFFRIVRDFWR- 858

Query: 182  LHSRSGQPTT------NNPDRIQNFIMFMDTKEEE 268
             HS+  + TT      +    +Q F+ + D KEEE
Sbjct: 859  -HSKPEEETTVPSPESSRSKTLQTFLAYFDEKEEE 892


>ref|XP_002306436.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222855885|gb|EEE93432.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 937

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
 Frame = +2

Query: 2    IHDKWLINVRASSCSATPTSVDSEQLDLKSFWALFLISAIACFLALLLYLCSTIYKFKRR 181
            IHDKWL+    S+CS+     + ++LDL+SFW L+LI  IAC LAL LY    + +F R 
Sbjct: 807  IHDKWLMR---SACSSQGAKFEVDRLDLRSFWGLYLICGIACLLALFLYFLKMVRQFSRH 863

Query: 182  LHSR---SGQPTTNNPDRIQNFIMFMDTKEEE 268
              S    SG+ +T+   R+Q F+ F+D KE+E
Sbjct: 864  YSSELDSSGRGSTS--ARLQTFLSFVDEKEQE 893


>gb|AFK41266.1| unknown [Lotus japonicus]
          Length = 225

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
 Frame = +2

Query: 2   IHDKWLINVRASSCSATPTSVDSEQLDLKSFWALFLISAIACFLALLLYLCSTIYKFKR- 178
           IHDKWL+     +C +    ++ ++L+L+SFW L+L+  +AC LALL+YL  T+ ++K+ 
Sbjct: 92  IHDKWLLR---RACLSQGAKLEVDRLNLRSFWGLYLVCGLACLLALLIYLFQTLRQYKKH 148

Query: 179 ---RLHSRSGQPTTNNPDRIQNFIMFMDTKEEEQTTK 280
               L S SGQ  + +  R+Q F+ F+D KEE   T+
Sbjct: 149 DPEELESSSGQGASGS-TRLQTFLSFVDEKEEIVKTR 184


>ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 927

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2    IHDKWLINVRASSCSATPTSVDSEQLDLKSFWALFLISAIACFLALLLYLCSTIYKFKRR 181
            IHDKWL++   S CS+  T ++S++L+LKSFW LFLI  IACF+AL +Y    + +    
Sbjct: 804  IHDKWLMH---SGCSSDTTEIESDRLELKSFWGLFLICGIACFIALFIYFLQIMRQLDHV 860

Query: 182  LHSRSGQPT--TNNPDRIQNFIMFMDTKEEEQTTK 280
              S S  P+  ++   R+   +  MD KE+   +K
Sbjct: 861  PPSESDSPSQGSSRSGRLHRLLSLMDEKEDPSKSK 895


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