BLASTX nr result

ID: Scutellaria23_contig00018429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018429
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu...    77   1e-12
ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786...    63   2e-08
ref|XP_002330274.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003632462.1| PREDICTED: upstream activation factor subuni...    63   3e-08
emb|CBI23284.3| unnamed protein product [Vitis vinifera]               63   3e-08

>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
           communis] gi|223538407|gb|EEF40013.1| Upstream
           activation factor subunit UAF30, putative [Ricinus
           communis]
          Length = 322

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/68 (60%), Positives = 46/68 (67%)
 Frame = +3

Query: 57  MVSDSDLIERLRYFLSISDXXXXXXXXXXXXXEEDLGIDLSDRKAFIREQVDTYMQSQFE 236
           MVSDS+LIERLR FL  SD             EED GIDLSD+KAFIREQVD ++QSQFE
Sbjct: 1   MVSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFLQSQFE 60

Query: 237 NVANNEDE 260
               NE+E
Sbjct: 61  ENDQNEEE 68


>ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786835 [Glycine max]
          Length = 346

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/68 (50%), Positives = 41/68 (60%)
 Frame = +3

Query: 57  MVSDSDLIERLRYFLSISDXXXXXXXXXXXXXEEDLGIDLSDRKAFIREQVDTYMQSQFE 236
           MVS+S+LI RLR FL  SD             E D GIDLSDRKAFIREQVD ++Q++  
Sbjct: 1   MVSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHN 60

Query: 237 NVANNEDE 260
                E+E
Sbjct: 61  QSQQEEEE 68


>ref|XP_002330274.1| predicted protein [Populus trichocarpa] gi|222871309|gb|EEF08440.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
 Frame = +3

Query: 57  MVSDSDLIERLRYFLSISDXXXXXXXXXXXXXEEDLGIDLSDRKAFIREQVDTYMQS--- 227
           MVSDSDL+ RLR  L  SD             EEDLG+DLS++K FIREQ+DT++++   
Sbjct: 1   MVSDSDLVTRLREILRRSDLDTATAGSIRRQLEEDLGVDLSEKKKFIREQIDTFLETFNG 60

Query: 228 ---QFENVANNED 257
              + ENV+ NE+
Sbjct: 61  GEGKSENVSENEN 73


>ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
           vinifera]
          Length = 296

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = +3

Query: 57  MVSDSDLIERLRYFLSISDXXXXXXXXXXXXXEEDLGIDLSDRKAFIREQVDTYMQSQFE 236
           MVSDS+L+ RL  FL  SD             EED GIDLS +KAFIRE VD ++QSQ E
Sbjct: 1   MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60

Query: 237 NVANNEDE 260
               +E +
Sbjct: 61  KAEEDEGD 68


>emb|CBI23284.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = +3

Query: 57  MVSDSDLIERLRYFLSISDXXXXXXXXXXXXXEEDLGIDLSDRKAFIREQVDTYMQSQFE 236
           MVSDS+L+ RL  FL  SD             EED GIDLS +KAFIRE VD ++QSQ E
Sbjct: 1   MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQSQLE 60

Query: 237 NVANNEDE 260
               +E +
Sbjct: 61  KAEEDEGD 68


Top