BLASTX nr result

ID: Scutellaria23_contig00018319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018319
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   332   1e-88
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              332   1e-88
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   319   7e-85
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...   317   3e-84
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   316   8e-84

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  332 bits (850), Expect = 1e-88
 Identities = 168/308 (54%), Positives = 219/308 (71%), Gaps = 5/308 (1%)
 Frame = -3

Query: 912 MGRRKQIRPRRSGGILEKQST----ESELSKDNEKQPGKDDAVDAEEPFFVEIDKSSWVS 745
           MGRRKQ +P RS G++E+  T    E EL+   E   G D+  DAE P FVE+D++ W S
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQG-DEVGDAETPLFVEVDRTGWGS 59

Query: 744 EEHYDVSEIILLNLWVNEEFYGYQLTEEFFRDSKCFLRFKLSGVNQHLDRMKLGHWPVLS 565
            EH D+SEI+L +L + EEF+GY L E F+ +SKC LRF+L   NQ + R++LGHWPV++
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 564 ESNVCLQFVQKSTAE-GSERDVVMVSGSVDGTDEGVTGLVHLVSLKYLTVRPLLEVEFVE 388
            S++ L+FV+K  +E G E D V++SG  DG DEGV+GLVHL  LK LT+RP+L V F E
Sbjct: 120 ASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSE 179

Query: 387 GMASIFIRVEILKNVFDECESLLDNTRQLWKKSMMNAMAWLRPEVMTSEARYGCKGVEDM 208
           G++ + +RVEIL+  FD CESLLDN+R LWKKSMM+ MAWLRPEV TSEARYG    ++M
Sbjct: 180 GVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKEM 239

Query: 207 EVHEPLAAKDDPSSSRQQMRFDVSSFYEAIKPSKEAPMLEDNLPDLRPELRPYQRRAAYW 28
           ++   +        S++   FD + FYEAIKPSKE P+L+ ++PDL PELRPYQRRAAYW
Sbjct: 240 DIDSNMGMDVGDLDSKKHQNFDAAGFYEAIKPSKEDPLLDYDMPDLLPELRPYQRRAAYW 299

Query: 27  MVTREKGG 4
           MV RE  G
Sbjct: 300 MVQREIKG 307


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  332 bits (850), Expect = 1e-88
 Identities = 168/308 (54%), Positives = 219/308 (71%), Gaps = 5/308 (1%)
 Frame = -3

Query: 912 MGRRKQIRPRRSGGILEKQST----ESELSKDNEKQPGKDDAVDAEEPFFVEIDKSSWVS 745
           MGRRKQ +P RS G++E+  T    E EL+   E   G D+  DAE P FVE+D++ W S
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQG-DEVGDAETPLFVEVDRTGWGS 59

Query: 744 EEHYDVSEIILLNLWVNEEFYGYQLTEEFFRDSKCFLRFKLSGVNQHLDRMKLGHWPVLS 565
            EH D+SEI+L +L + EEF+GY L E F+ +SKC LRF+L   NQ + R++LGHWPV++
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFYENSKCCLRFRLCNANQFVGRIRLGHWPVVA 119

Query: 564 ESNVCLQFVQKSTAE-GSERDVVMVSGSVDGTDEGVTGLVHLVSLKYLTVRPLLEVEFVE 388
            S++ L+FV+K  +E G E D V++SG  DG DEGV+GLVHL  LK LT+RP+L V F E
Sbjct: 120 ASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFSE 179

Query: 387 GMASIFIRVEILKNVFDECESLLDNTRQLWKKSMMNAMAWLRPEVMTSEARYGCKGVEDM 208
           G++ + +RVEIL+  FD CESLLDN+R LWKKSMM+ MAWLRPEV TSEARYG    ++M
Sbjct: 180 GVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKEM 239

Query: 207 EVHEPLAAKDDPSSSRQQMRFDVSSFYEAIKPSKEAPMLEDNLPDLRPELRPYQRRAAYW 28
           ++   +        S++   FD + FYEAIKPSKE P+L+ ++PDL PELRPYQRRAAYW
Sbjct: 240 DIDSNMGMDVGDLDSKKHQNFDAAGFYEAIKPSKEDPLLDYDMPDLLPELRPYQRRAAYW 299

Query: 27  MVTREKGG 4
           MV RE  G
Sbjct: 300 MVQREIKG 307


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score =  319 bits (818), Expect = 7e-85
 Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 10/312 (3%)
 Frame = -3

Query: 912 MGRRKQIRPRRSGGILEKQSTESELSKD--NEKQPGKDDAVDAE------EPFFVEIDKS 757
           MGRRKQ RP RSGG++ + +  +  S +  N+++    DA   E      +P+FVE++++
Sbjct: 1   MGRRKQARPHRSGGLIIQNNAAASASAELKNQRKASSSDAQPTELVGIDEQPYFVEVERN 60

Query: 756 SWVSEEHYDVSEIILLNLWVNEEFYGYQLTEEFFRDSKCFLRFKLSGVNQH-LDRMKLGH 580
           SW S  H D SE++L  L + +E+  +++T+ F+ DSK  LRF++S V Q  L R+KLGH
Sbjct: 61  SWASNHHRDASELVLHGLNLRQEYSSFRVTDGFYHDSKYSLRFRVSNVKQSVLSRIKLGH 120

Query: 579 WPVLSESNVCLQFVQKSTAEGS-ERDVVMVSGSVDGTDEGVTGLVHLVSLKYLTVRPLLE 403
           WPV S S++ L+ ++KS  E   E + V+ SGS DG DEG+TGLVHL ++++LT+RP+L 
Sbjct: 121 WPVFSSSDISLELIEKSMVEEDREVESVIFSGSFDGPDEGITGLVHLTNMEFLTLRPVLG 180

Query: 402 VEFVEGMASIFIRVEILKNVFDECESLLDNTRQLWKKSMMNAMAWLRPEVMTSEARYGCK 223
           V+F E M  + +RVEIL+  FD CESLL++TRQ+WKKSMMN MAWLRPEVMTSEARY   
Sbjct: 181 VDFSEKMTPLRMRVEILEKAFDACESLLESTRQIWKKSMMNVMAWLRPEVMTSEARYRHA 240

Query: 222 GVEDMEVHEPLAAKDDPSSSRQQMRFDVSSFYEAIKPSKEAPMLEDNLPDLRPELRPYQR 43
              +MEV+      DD S+S ++ +FDV+  YEAIKPSK  PMLED+LPDL P LRPYQR
Sbjct: 241 KSTEMEVNMAAEIGDDTSNSGKRAQFDVAGLYEAIKPSKSDPMLEDDLPDLLPTLRPYQR 300

Query: 42  RAAYWMVTREKG 7
           RAA+WMV +EKG
Sbjct: 301 RAAHWMVQQEKG 312


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
           gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
           helicase, putative [Ricinus communis]
          Length = 1588

 Score =  317 bits (812), Expect = 3e-84
 Identities = 161/306 (52%), Positives = 219/306 (71%), Gaps = 4/306 (1%)
 Frame = -3

Query: 912 MGRRKQIRPRRSGGILEKQSTESELSKDNEKQPGKDDA---VDAEEPFFVEIDKSSWVSE 742
           MGRRKQ RP RSGG++   S  SE   D +K P  D A   +    P++VE+DKS+WVS 
Sbjct: 1   MGRRKQARPNRSGGLVIANSA-SEAELDKQKAPKTDSAEKAIPVSRPYYVEVDKSNWVSN 59

Query: 741 EHYDVSEIILLNLWVNEEFYGYQLTEEFFRDSKCFLRFKLSGVNQH-LDRMKLGHWPVLS 565
           +H+D+SE+IL +L + E +   ++   F ++SK  LR ++  V+   LDR+KLG+WPVLS
Sbjct: 60  DHFDISEVILNDLNLGEAYSSCRIKSNFSQESKYSLRVRVCNVDGFVLDRIKLGYWPVLS 119

Query: 564 ESNVCLQFVQKSTAEGSERDVVMVSGSVDGTDEGVTGLVHLVSLKYLTVRPLLEVEFVEG 385
            S++ L+ +++S  E  E   V+ SGS DG DEG+T LVHL+S+++LT+RP+L   + E 
Sbjct: 120 SSDISLECIEESMVEDKEMQSVIFSGSFDGPDEGITSLVHLISMEFLTLRPVLGFNYSEE 179

Query: 384 MASIFIRVEILKNVFDECESLLDNTRQLWKKSMMNAMAWLRPEVMTSEARYGCKGVEDME 205
           M S+ +RVEILK  FD C+SLL+NTRQLWKKSMMN MAWLRPEV+TSEARYG     +++
Sbjct: 180 MMSLRVRVEILKKAFDSCKSLLENTRQLWKKSMMNVMAWLRPEVVTSEARYGVTKSTEVD 239

Query: 204 VHEPLAAKDDPSSSRQQMRFDVSSFYEAIKPSKEAPMLEDNLPDLRPELRPYQRRAAYWM 25
           +   +   +D S SR++ RFDV+ FYEAIKPSK +P+L D+LPDL P LRPYQRRAAYWM
Sbjct: 240 LVGEMG--NDISYSRKRPRFDVAGFYEAIKPSKSSPILNDDLPDLLPVLRPYQRRAAYWM 297

Query: 24  VTREKG 7
           + +EKG
Sbjct: 298 LQQEKG 303


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  316 bits (809), Expect = 8e-84
 Identities = 155/306 (50%), Positives = 221/306 (72%), Gaps = 5/306 (1%)
 Frame = -3

Query: 912 MGRRKQIRPRRSGGIL--EKQSTESELSKDNEKQPGKD---DAVDAEEPFFVEIDKSSWV 748
           MGR+K  +P+R+GGI+     + E+EL K N  + GK+   D+   ++P+FVE+D+  W+
Sbjct: 1   MGRQKS-KPQRAGGIILETNAAAETELDKQNVIEGGKETKGDSSGIDKPYFVEVDRCGWL 59

Query: 747 SEEHYDVSEIILLNLWVNEEFYGYQLTEEFFRDSKCFLRFKLSGVNQHLDRMKLGHWPVL 568
           S EH D+SE++L +L + E F G++L+E+F+RD +  LRF++  V+  L R+KLGHWPV+
Sbjct: 60  SSEHLDISEVVLSDLNLREGFSGFELSEDFYRDQQYLLRFQVCNVSNVLGRIKLGHWPVI 119

Query: 567 SESNVCLQFVQKSTAEGSERDVVMVSGSVDGTDEGVTGLVHLVSLKYLTVRPLLEVEFVE 388
             +++ L+FV++ T +  E   V++SG  DG DEGVTGL+HL SLK++T+RP+L     E
Sbjct: 120 PYTDIHLEFVRRVTIDHVETYTVLLSGIFDGPDEGVTGLLHLASLKFVTLRPVLGARLSE 179

Query: 387 GMASIFIRVEILKNVFDECESLLDNTRQLWKKSMMNAMAWLRPEVMTSEARYGCKGVEDM 208
            ++S+ IRVE+LK+ FD CESLLD++RQLWKKSM+N M+WLRPE+MTSE RYG      M
Sbjct: 180 EISSLRIRVEVLKSAFDACESLLDSSRQLWKKSMVNVMSWLRPEIMTSEVRYGFGTCMKM 239

Query: 207 EVHEPLAAKDDPSSSRQQMRFDVSSFYEAIKPSKEAPMLEDNLPDLRPELRPYQRRAAYW 28
           EV   +   DD   +R+  RFD + F EAIKPSK  PML+D++P+L P+LRPYQRRAA+W
Sbjct: 240 EVDPQIEMADDTCKARKHARFDPAGFCEAIKPSKSEPMLKDDIPELLPKLRPYQRRAAFW 299

Query: 27  MVTREK 10
           MV REK
Sbjct: 300 MVEREK 305


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