BLASTX nr result

ID: Scutellaria23_contig00018194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018194
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]   125   5e-27
emb|CBI14898.3| unnamed protein product [Vitis vinifera]              125   9e-27
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...   113   3e-23
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   108   9e-22
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...   105   7e-21

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score =  125 bits (315), Expect = 5e-27
 Identities = 76/174 (43%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
 Frame = +2

Query: 35   KETLELVWIRATTQMCIXXXXXXXXXXXXXXXXVRLNQGIAVVEMEFDHSDYVSKAEKSW 214
            K  LE +W +AT ++C                 V ++QG+AV E+EF H DYVSKAEKSW
Sbjct: 732  KGQLEFLWKQAT-EICQSSSLKNFLRKQGKLSSVIVSQGMAVAELEFQHPDYVSKAEKSW 790

Query: 215  KVIASALQHMLGYNVELRINLARNDSTKN-GKFKRPSFSLFNCSRRVHLK---------- 361
            K+IAS+LQ +LG NVE+RINLA   S K   K K+PSFS F+CSRR+ LK          
Sbjct: 791  KLIASSLQSILGCNVEIRINLAPCTSVKGYAKVKKPSFSFFSCSRRMRLKSHSTSEHGSD 850

Query: 362  -XXXXXXXXXXXXXXXKYIETCSSDCGSQISCLCCHGQDLFKTIRTSDGNALSI 520
                            K I TCSSDCGSQ+S +C    +  +T+R  +GN L I
Sbjct: 851  QSDCSDFTSEKAMIRDKTIGTCSSDCGSQVSHVCYXRTEAARTLRNREGNVLGI 904


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  125 bits (313), Expect = 9e-27
 Identities = 76/174 (43%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
 Frame = +2

Query: 35   KETLELVWIRATTQMCIXXXXXXXXXXXXXXXXVRLNQGIAVVEMEFDHSDYVSKAEKSW 214
            K  LE +W +AT ++C                 V ++QG+AV E+EF H DYVSKAEKSW
Sbjct: 550  KGQLEFLWKQAT-EICQSSSLKNFLRKQGKLSSVIVSQGMAVAELEFQHPDYVSKAEKSW 608

Query: 215  KVIASALQHMLGYNVELRINLARNDSTKN-GKFKRPSFSLFNCSRRVHLK---------- 361
            K+IAS+LQ +LG NVE+RINLA   S K   K K+PSFS F+CSRR+ LK          
Sbjct: 609  KLIASSLQSILGCNVEIRINLAPCTSVKGYAKVKKPSFSFFSCSRRMRLKSHSTSEHGSD 668

Query: 362  -XXXXXXXXXXXXXXXKYIETCSSDCGSQISCLCCHGQDLFKTIRTSDGNALSI 520
                            K I TCSSDCGSQ+S +C    +  +T+R  +GN L I
Sbjct: 669  QSDCSDFTSEKAMIRDKTIGTCSSDCGSQVSHVCYLRTEAARTLRNREGNVLGI 722


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  113 bits (283), Expect = 3e-23
 Identities = 82/218 (37%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
 Frame = +2

Query: 35   KETLELVWIRATTQMCIXXXXXXXXXXXXXXXXVRLNQGIAVVEMEFDHSDYVSKAEKSW 214
            K TL+ +W RA+ ++C                 +  ++G+AV E+EF H +Y SKAEKSW
Sbjct: 698  KVTLDSIWKRAS-ELCKSNSLRNFLRKQGKLSSLHFDKGLAVAELEFHHPNYASKAEKSW 756

Query: 215  KVIASALQHMLGYNVELRINL-ARNDSTKNGKFKRPSFSLFNCSRRVHLK---------- 361
            K IAS+LQ +LG NVE+RINL      +K  K +R SFSLF CSR    K          
Sbjct: 757  KFIASSLQTVLGCNVEIRINLVVCAPVSKCAKLRRLSFSLFGCSRITRHKSHPPMECGCG 816

Query: 362  --XXXXXXXXXXXXXXXKYIETCSSDCGSQISCLCCHGQDLFKTIRTSDGNALSIEP--- 526
                             K I  C SDCGSQI   C H  ++ K +R S+GN LSI P   
Sbjct: 817  SDSDYSDHISEKPMIREKAISACPSDCGSQIPHSCYHRVEVGKALRNSEGNVLSIGPTSS 876

Query: 527  -NTLPNSALK------PGSKEHSKFHCWRTAIFSFRKA 619
              +LPN   K      P SK     H +   IFS ++A
Sbjct: 877  HRSLPNDTSKTPGYGFPSSKAGESDHDY--TIFSGQEA 912


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223550389|gb|EEF51876.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1025

 Score =  108 bits (270), Expect = 9e-22
 Identities = 72/177 (40%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
 Frame = +2

Query: 35   KETLELVWIRATTQMCIXXXXXXXXXXXXXXXXVRLNQGIAVVEMEFDHSDYVSKAEKSW 214
            K TLE +W  AT ++C                 + +NQ +AV E+EF   DYVSKAEKSW
Sbjct: 697  KATLESIWKNAT-ELCQSNSLRNFLGKQGKLSSLCVNQDLAVAELEFHRPDYVSKAEKSW 755

Query: 215  KVIASALQHMLGYNVELRINLARNDST-KNGKFKRPSFSLFNCSRRVHLK---------- 361
            K IASALQ +LG NVE+RINL   DS  K  K ++  FSLF+CSRRV  +          
Sbjct: 756  KTIASALQSILGRNVEIRINLVLCDSALKCKKLRKLPFSLFSCSRRVLRRSQLPTECGSD 815

Query: 362  XXXXXXXXXXXXXXXKYIETCSSDCGSQISCLCCHGQDLFKTIRTSDGNALSIEPNT 532
                           + I TCSSDC SQ+        D+ K +R ++GN LSI  N+
Sbjct: 816  SDYSGHMSEKPIKGDRVILTCSSDCRSQMPHYIFPRVDVVKALRNNEGNVLSIGRNS 872


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
            predicted protein [Populus trichocarpa]
          Length = 907

 Score =  105 bits (262), Expect = 7e-21
 Identities = 65/172 (37%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
 Frame = +2

Query: 41   TLELVWIRATTQMCIXXXXXXXXXXXXXXXXVRLNQGIAVVEMEFDHSDYVSKAEKSWKV 220
            TL+ +W R T+++C                 + +N+G+AV E+EF HSDY SKAEKSWK+
Sbjct: 643  TLDTIWKR-TSELCQSNSLRNFLRKQGKLSSLHINRGLAVAELEFHHSDYASKAEKSWKL 701

Query: 221  IASALQHMLGYNVELRIN--LARNDSTKNGKFKRPSFSLFNCSRRVHLK----------X 364
            IAS LQ +LG NVE+RIN  L    ++K  K  + SF  F CSRR+  K           
Sbjct: 702  IASLLQTILGCNVEIRINLVLCTPPASKCAKLWKQSFCFFGCSRRMRHKSQPPIECGIDS 761

Query: 365  XXXXXXXXXXXXXXKYIETCSSDCGSQISCLCCHGQDLFKTIRTSDGNALSI 520
                          + I  C SD  SQI   C H  ++ + +R S+GN LSI
Sbjct: 762  DYSDHISERPMIRERAISACPSDSRSQIPHNCYHRAEVVRALRNSEGNVLSI 813


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