BLASTX nr result

ID: Scutellaria23_contig00018137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018137
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...    74   8e-11
ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08

>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Vitis vinifera]
          Length = 1294

 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 74/276 (26%), Positives = 109/276 (39%), Gaps = 27/276 (9%)
 Frame = +3

Query: 6   ENPWERSNTQGAGSLKDTNDNPWERNNTQGAGSLKDTSDNPWEINYTQAAGGLKDLQ--- 176
           ++PWE  N QG    K    N W  N  +      D  DN W+ + T A+G ++D     
Sbjct: 182 DSPWEYWNVQGVLKEKARVRNQWGGNINESRNLNGD--DNRWKHSCTWASGAVRDDSWGN 239

Query: 177 ----VWGKWEDTV-------NLKN--DNPWEQSCSQPVDSLKDSAWKSGNGSWGRSQGID 317
                W  W +         NL N  DN W  SC+Q   + +D+A     G W  SQG +
Sbjct: 240 CEGNSWRMWNEVPKPINQLSNLDNGVDN-WNSSCNQANAAQRDNAC----GGW--SQGWN 292

Query: 318 KCRSSTSVDYRYDNSWSSNRQTMAVXXXXXXXXXXXXXXXXXENNTWGWSPGNINAEKPN 497
               S ++D   D+ W    Q                      NN WG +  + +  K  
Sbjct: 293 YQNKSRNLD-TVDDPWERGCQ--------GTESMGFKQGGDLGNNPWGGNHWDNSIYKQK 343

Query: 498 NLLS-------CGY----SFQNNYSSGSKERAWRNESWSGRSAEYQAYEPKSWDSQTNRL 644
           N+         C +    + ++   SG K + W+   W   + E     PK  +S+    
Sbjct: 344 NVFDSHSPWKYCAFQGTEAAKDRSDSGDKSQGWKQ--WENHNNE-----PKKLESRKVSG 396

Query: 645 GGRSFHGGCRKRESSIQYTSRYKSSKYHSDTYGDSH 752
           G   ++GGCRKRE S + TS YK S+   D+Y   H
Sbjct: 397 GWGVWNGGCRKREGSHKNTSSYKCSRVQGDSYQTGH 432


>ref|XP_002332417.1| predicted protein [Populus trichocarpa] gi|222832370|gb|EEE70847.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 25/243 (10%)
 Frame = +3

Query: 99  GSLKDTSD--NPWEINY-TQAAGGLKD-LQVWGKWEDTVNL-----KNDNPWEQSCSQPV 251
           G  ++T D  NPWE N  TQ++  L D  + W +W+  +N      K DNPWE+  SQ  
Sbjct: 159 GCYENTDDVKNPWESNNNTQSSLSLIDKAKSWNQWDSDINKSSNLNKVDNPWERGFSQES 218

Query: 252 DSLKDSAW-KSGNGSWGRSQGIDKCRSSTSVDYRYD-----NSWSSNRQTMAVXXXXXXX 413
           +++K   W   GN SWG +       S   VD   D     N W  +RQ +         
Sbjct: 219 EAVKGKTWGVCGNKSWGWN------HSGNHVDQSNDWNNNSNPWQHSRQGVDPANDKGWG 272

Query: 414 XXXXXXXXXXENNTWGWSPGNINAEKPNNLLSCGYSFQNNYSSGSKERAWRNESWSGRSA 593
                     ++ +  W+         N+  S G  F    S  SK+R W +   + +  
Sbjct: 273 NLRDSSRGYNQHESRKWN---------NDCKSSGNGFFQG-SGASKDRKWEDNGSNSQGW 322

Query: 594 EYQAYEPKSWDSQTNRLGGRSF--HG--------GCRKRESSIQYTSRYKSSKYHSDTYG 743
                  K WD+      G  F  HG        G  +RE + Q+ + Y+S+++  D + 
Sbjct: 323 -------KQWDNYGKNTKGLDFRKHGGGWETRNEGSWQREGAHQHITGYESTRFQGDGFQ 375

Query: 744 DSH 752
             H
Sbjct: 376 TGH 378


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