BLASTX nr result

ID: Scutellaria23_contig00018109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018109
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   143   4e-32
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]   117   2e-24
ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,...   110   2e-22

>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
           gi|449518358|ref|XP_004166209.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  143 bits (360), Expect = 4e-32
 Identities = 71/107 (66%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
 Frame = -1

Query: 319 FQDIGSGNNARGLPS-DDYFATIHHISNIVRRDIYMERTLNKMRISSIVNSELVYRVLRS 143
           F +  S  N    PS DDYFA IHHIS+IVRRD YMERTLNK+RIS++ NSELV+RVLR+
Sbjct: 23  FSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNL-NSELVFRVLRA 81

Query: 142 CCNCGIESFRFFNWARTHHPNYEPTTVEFEELLKILAANRNWETMWK 2
           C N G ESFRFFNWA +H+P+Y+PTT+EFEEL+K LA  R + TMWK
Sbjct: 82  CSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWK 128


>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial [Vitis vinifera]
           gi|296085168|emb|CBI28663.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score =  127 bits (319), Expect = 2e-27
 Identities = 69/120 (57%), Positives = 84/120 (70%)
 Frame = -1

Query: 361 IVTFVKPLTTGSNLFQDIGSGNNARGLPSDDYFATIHHISNIVRRDIYMERTLNKMRISS 182
           I+T +K LTT +   Q      N      DDYFA +HHIS IVRRD Y+ERTLNK+ IS 
Sbjct: 21  ILTHLKTLTTITTHLQ------NTITSKKDDYFAVVHHISAIVRRDFYLERTLNKLPIS- 73

Query: 181 IVNSELVYRVLRSCCNCGIESFRFFNWARTHHPNYEPTTVEFEELLKILAANRNWETMWK 2
            V S+LVYRVLRSC N G ES RFFNWAR+ H +Y+PTT+E+EELLK LA  + ++ MWK
Sbjct: 74  -VTSDLVYRVLRSCPNSGTESLRFFNWARS-HLSYQPTTLEYEELLKTLARTKQFQPMWK 131


>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
          Length = 356

 Score =  117 bits (294), Expect = 2e-24
 Identities = 58/88 (65%), Positives = 70/88 (79%)
 Frame = -1

Query: 265 FATIHHISNIVRRDIYMERTLNKMRISSIVNSELVYRVLRSCCNCGIESFRFFNWARTHH 86
           FA +HHIS IVRRD Y+ERTLNK+ IS  V S+LVYRVLRSC N G ES RFFNWAR+ H
Sbjct: 4   FAVVHHISAIVRRDFYLERTLNKLPIS--VTSDLVYRVLRSCPNSGTESLRFFNWARS-H 60

Query: 85  PNYEPTTVEFEELLKILAANRNWETMWK 2
            +Y+PTT+E+EELLK LA  + ++ MWK
Sbjct: 61  XSYQPTTLEYEELLKTLARTKQFQPMWK 88


>ref|XP_003524064.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Glycine max]
          Length = 450

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/90 (61%), Positives = 71/90 (78%)
 Frame = -1

Query: 274 DDYFATIHHISNIVRRDIYMERTLNKMRISSIVNSELVYRVLRSCCNCGIESFRFFNWAR 95
           D+YFA IHH+SNIVRRD Y+ERTLNK+RI+  V  ELV+RVLR+C N   ES RFFNWAR
Sbjct: 36  DEYFAVIHHVSNIVRRDFYLERTLNKLRIT--VTPELVFRVLRACSNNPTESLRFFNWAR 93

Query: 94  THHPNYEPTTVEFEELLKILAANRNWETMW 5
           T HP+Y PT++EFE+++  LA    +++MW
Sbjct: 94  T-HPSYSPTSLEFEQIVTTLARANTYQSMW 122


>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 451

 Score =  110 bits (276), Expect = 2e-22
 Identities = 61/125 (48%), Positives = 81/125 (64%), Gaps = 8/125 (6%)
 Frame = -1

Query: 352 FVKPLTTGSNLFQDIG--------SGNNARGLPSDDYFATIHHISNIVRRDIYMERTLNK 197
           F+ P TT +   Q +         S NN +    D YFA IHHI+NIVRRD Y ERTLNK
Sbjct: 8   FILPKTTATVTLQPLRHLKVLASTSTNNTK----DAYFALIHHITNIVRRDFYPERTLNK 63

Query: 196 MRISSIVNSELVYRVLRSCCNCGIESFRFFNWARTHHPNYEPTTVEFEELLKILAANRNW 17
             +++ V SELV+RVLR+C     ES RFFNW+R +   Y PT++E+EEL+KILA ++ +
Sbjct: 64  --LNAPVTSELVFRVLRACSRSPTESLRFFNWSRAY---YTPTSIEYEELIKILAKSKRY 118

Query: 16  ETMWK 2
            +MWK
Sbjct: 119 SSMWK 123


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