BLASTX nr result

ID: Scutellaria23_contig00018094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00018094
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
emb|CBI39592.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_003609027.1| Pentatricopeptide repeat-containing protein ...    75   6e-12

>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = +1

Query: 28  HRPLSTGHPLIADP---DLQSQIPS-LISAQEWSQLKPLIESSTPADXXXXXXXXXXXXS 195
           H P  T +P    P   D    I S LIS Q+WS LK  ++  +P D             
Sbjct: 28  HLPFCTYNPTCTAPISNDFDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDP 87

Query: 196 DCILSFFKWSQHEFHLAYSVQEYVRLFILLANDREYPKIRSLLHIYVNQGEPISISTFCN 375
             +L +F WS+ E ++ YS++   RL  LLAN + YPKIRS+L  +V      SIS   +
Sbjct: 88  LLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFH 147

Query: 376 SLLNVSDNSCAHSVVFDMLILALV 447
           SL   S   CA+S++ DML+LA V
Sbjct: 148 SLSVCSGQFCANSIIADMLVLAYV 171


>ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/123 (37%), Positives = 72/123 (58%)
 Frame = +1

Query: 79  SQIPSLISAQEWSQLKPLIESSTPADXXXXXXXXXXXXSDCILSFFKWSQHEFHLAYSVQ 258
           S I  L+S Q WS+LKP   ++ PA             S+ +L FF+WSQ EF ++Y ++
Sbjct: 21  STISELLSNQHWSELKPHFRTTKPA-IFLDQLFNAGVDSELVLRFFQWSQKEFRISYGLE 79

Query: 259 EYVRLFILLANDREYPKIRSLLHIYVNQGEPISISTFCNSLLNVSDNSCAHSVVFDMLIL 438
              ++  LLAN ++Y K+RS L   V + E  ++S+  +SLL   D  CA++++ DML+L
Sbjct: 80  TTGKVLHLLANSKKYSKVRSFLDKLV-KNEKHTVSSVFHSLLLGGDRPCANALITDMLVL 138

Query: 439 ALV 447
           A V
Sbjct: 139 AYV 141


>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/121 (36%), Positives = 67/121 (55%)
 Frame = +1

Query: 85  IPSLISAQEWSQLKPLIESSTPADXXXXXXXXXXXXSDCILSFFKWSQHEFHLAYSVQEY 264
           I  LI+ Q WS+LK +++ + P+              D IL +FKW+Q EF   ++V+++
Sbjct: 52  ISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQP-DLILCYFKWTQKEFGAIHNVEQF 110

Query: 265 VRLFILLANDREYPKIRSLLHIYVNQGEPISISTFCNSLLNVSDNSCAHSVVFDMLILAL 444
            RL  LLAN + Y KIR+LL  +       S ST  +SL  +    CA+S++ DML+ A 
Sbjct: 111 CRLLHLLANAKNYNKIRALLDSFAKNAH-YSNSTIFHSLSVLGSWGCANSIIVDMLVWAY 169

Query: 445 V 447
           V
Sbjct: 170 V 170


>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/121 (36%), Positives = 67/121 (55%)
 Frame = +1

Query: 85  IPSLISAQEWSQLKPLIESSTPADXXXXXXXXXXXXSDCILSFFKWSQHEFHLAYSVQEY 264
           I  LI+ Q WS+LK +++ + P+              D IL +FKW+Q EF   ++V+++
Sbjct: 52  ISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQP-DLILCYFKWTQKEFGAIHNVEQF 110

Query: 265 VRLFILLANDREYPKIRSLLHIYVNQGEPISISTFCNSLLNVSDNSCAHSVVFDMLILAL 444
            RL  LLAN + Y KIR+LL  +       S ST  +SL  +    CA+S++ DML+ A 
Sbjct: 111 CRLLHLLANAKNYNKIRALLDSFAKNAH-YSNSTIFHSLSVLGSWGCANSIIVDMLVWAY 169

Query: 445 V 447
           V
Sbjct: 170 V 170


>ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510082|gb|AES91224.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
 Frame = +1

Query: 58  IADPDLQS----QIPSLISAQEWSQLKPLIESSTPADXXXXXXXXXXXXSDCILSFFKWS 225
           I  P LQS     I  L+S Q WS+LKP +  + PA             S+ +L FFKWS
Sbjct: 10  IQGPILQSLSIPTISELLSKQHWSELKPHLRVTKPATFLDQLLNAGVD-SELVLRFFKWS 68

Query: 226 QHEFHLAYSVQEYVRLFILLANDREYPKIRSLLHIYVNQGEPISISTFCNSLLNVSDNSC 405
           Q E+ L+Y ++   ++   LAN + Y K+RS L  +V + E  ++S+  +SLL       
Sbjct: 69  QKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFV-KNEKHTVSSVFHSLLLDGGRPG 127

Query: 406 AHSVVFDMLILALV 447
           A +++ DML+LA V
Sbjct: 128 ATALIIDMLVLAYV 141


Top